All posts (Page 63 of 123)
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rOpenSci HQ 👨🏽💻👩🏼💻 🏗️
- Join our next Community Call on Involving Multilingual Communities June 28th.
- Video of our Community Call on Security for R is up, with a long list of resources.
- Our Community Manager, Stefanie Butland, spoke at R-Ladies Seattle and Fred Hutch about rOpenSci, Learning R, and Building Community May 22nd.
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Software Peer Review ✔
6 community-contributed packages passed software peer review
- nbaR - R Package Client for the Netherlands Biodiversity API
- Author: Hannes Hettling
- Issue: ropensci/onboarding#257
- Reviewers:
- git2rdata - Store and Retrieve Data.frames in a Git Repository
- Author: Thierry Onkelinx
- Issue: ropensci/onboarding#263
- Reviewers:
- citesdb - A high-performance database of shipment-level CITES trade data
- Author: Noam Ross
- Issue: ropensci/onboarding#292
- Reviewers:
- MtreeRing - A Shiny Application for Automatic Measurements of Tree-Ring Widths on Digital Images
- Author: Jingning Shi
- Issue: ropensci/onboarding#287
- Reviewers:
- rromeo - An R Client for SHERPA/RoMEO API
- Author: Matthias Grenié
- Issue: ropensci/onboarding#285
- Reviewers:
- tidync - A Tidy Approach to ‘NetCDF’ Data Exploration and Extraction
- Author: Michael Sumner
- Issue: ropensci/onboarding#174
- Reviewers:
Consider submitting your package or volunteering to review.
...rOpenSci’s community is increasingly international and multilingual. While we have operated primarily in English, we now receive submissions of packages from authors whose primary language is not. As we expand our community in this way, we want to learn from the experience of other organizations. How can we manage our peer-review process and open-source projects to be welcoming to non-native English speakers?
Our guest speakers will include:
- Rayna Harris, who has co-led work with The Carpentries in internationalization of curricula.
- Emilio Bruna, who as editor-in-chief of Biotropica, manages a journal with a heavily tropical-country audience and authorship base.
The call will be moderated by Melina Vidoni, an associate editor for rOpenSci software peer review. There will be 20 minutes for Q & A following the presentations.
...Software is maintained by people. While software can in theory live on indefinitely, to do so requires people. People change jobs, move locations, retire, and unfortunately die sometimes. When a software maintainer can no longer maintain a package, what happens to the software?
Because of the fragility of people in software, in an ideal world a piece of software should have as many maintainers as possible. Increasing maintainers increases the so-called bus factor. A lower number of maintainers means fewer people have to get hit by a bus to then have no maintainers.
...As part of our continuous effort to improve rOpenSci infrastructure, we are rolling out a new service to automatically build and host documentation for all rOpenSci packages.
The webpages are generated using the popular pkgdown system with our rOpenSci template, and get automatically published on https://docs.ropensci.org/. Some examples:
- https://docs.ropensci.org/drake/
- https://docs.ropensci.org/magick/
- https://docs.ropensci.org/writexl/
- https://docs.ropensci.org/stplanr/
- https://docs.ropensci.org/osmdata/
- https://docs.ropensci.org/visdat/
- https://docs.ropensci.org/tesseract/
We intend this to become the central place to find documentation for rOpenSci packages. We are still rolling this out so not all packages are there yet, but the majority is online now.
...We’ve been following rOpenSci’s work for a long time, and we use several packages on a daily basis for our scientific projects, especially taxize to clean species names, rredlist to extract species IUCN statuses or [treeio](many probs with this post) to work with phylogenetic trees. rOpensci is a perfect incarnation of a vibrant and diverse community where people learn and develop new ideas, especially regarding scientific packages. We’ve also noticed how much the thorough review process improves the quality of the packages that join the rOpenSci ecosystem. And while we were admiring the dynamics of rOpenSci community, we started to wonder how we could contribute to this ecosystem. And this is how we started our quest to find a project that could fit rOpenSci goals while at the same time teach us new skills....
