Spatial Gaps in Global Biodiversity Information and the Role of Citizen Science | 2016 | Amano et al. | BioScience | rgbif |
A botanical inventory of forest on karstic limestone and metamorphic substrate in the Chiquibul Forest, Belize, with focus on woody taxa | 2015 | Baden et al. | Edinburgh Journal of Botany | taxize |
Biodiversity ensures plant-pollinator phenological synchrony against climate change | 2013 | Bartomeus et al. | Ecol Lett | rgbif |
Discovering and developing primary biodiversity data from social networking sites: A novel approach | 2014 | Barve | Ecological Informatics | rgbif |
Retrieving taxa names from large biodiversity data collections using a flexible matching workflow | 2015 | Vanden Berghe et al. | Ecological Informatics | taxize |
TR8: an R package for easily retrieving plant species traits | 2015 | Bocci | Methods in Ecology and Evolution | taxize |
A macro-ecological perspective on crassulacean acid metabolism (CAM) photosynthesis evolution in Afro-Madagascan drylands: Eulophiinae orchids as a case study | 2015 | Bone et al. | New Phytol | rgbif |
Near real time weather and ocean model data access with rNOMADS | 2015 | Bowman & Lees | Computers & Geosciences | rnoaa |
Beyond species-specific assessments: an analysis and validation of environmental distance metrics for non-indigenous species risk assessment | 2015 | Bradie et al. | Biological Invasions | taxize |
A preliminary inventory of the catfishes of the lower Rio Nhamundá, Brazil (Ostariophysi, Siluriformes | 2015 | Collins et al. | Biodiversity Data Journal | rgbif |
Co-extinction in a host-parasite network: identifying key hosts for network stability | 2015 | Dallas & Cornelius | Scientific Reports | helminthR |
The changing patterns of plant naturalization in Australia | 2015 | Dodd et al. | Diversity Distrib | taxize |
R for all (I): Introduction to the new age of biological analyses | 2013 | Drozd & Šipoš | Casopis Slezskeho Zemskeho Muzea A | rgbif, rdryad, rfisheries, RMendeley, treeBASE, rfishbase, taxize, rsnsps, rvertnet, rentrez |
Synthesis and comparative analysis of physiological tolerance and life-history growth traits of marine aquaculture species | 2016 | Froehlich et al. | Aquaculture | rfishbase |
taxize: taxonomic search and retrieval in R | 2013 | Chamberlain & Szöcs | F1000Research | taxize |
Comparative genomics in the Asteraceae reveals little evidence for parallel evolutionary change in invasive taxa | 2015 | Hodgins et al. | Mol Ecol | taxize |
SDMdata: A Web-Based Software Tool for Collecting Species Occurrence Records | 2015 | Kong et al. | PLoS ONE | rgbif |
Data integration in biological research: an overview | 2015 | Lapatas et al. | J of Biol Res-Thessaloniki | taxize |
A pharyngeal jaw evolutionary innovation facilitated extinction in Lake Victoria cichlids | 2015 | McGee et al. | Science | rfishbase |
camtrapR: an R package for efficient camera trap data management | 2016 | Niedballa et al. | Methods in Ecology and Evolution | taxize |
NoSQL Data Model for Semi-automatic Integration of Ethnomedicinal Plant Data from Multiple Sources | 2014 | Ningthoujam et al. | Phytochemical Analysis | taxize |
Dataset of Passerine bird communities in a Mediterranean high mountain (Sierra Nevada, Spain | 2016 | Pérez-Luque et al. | ZK | taxize |
Evolutionarily Stable Strategies for Fecundity and Swimming Speed of Fish | 2016 | Plank et al. | Bull Math Biol | rfishbase |
Best publishing practices to improve user confidence in scientific software | 2015 | Poisot | IEE | taxize |
Are all species necessary to reveal ecologically important patterns? | 2014 | Pos et al. | Ecology and Evolution | taxize |
How predation shaped fish: the impact of fin spines on body form evolution across teleosts | 2015 | Price et al. | Proc. R. Soc. B | rfishbase |
Australian acacias as invasive species: lessons to be learnt from regions with long planting histories | 2015 | Richardson et al. | Southern Forests: a Journal of Forest Science | rgbif |
Non-native species modify the isotopic structure of freshwater fish communities across the globe | 2015 | Sagouis et al. | Ecography | rfishbase |
Adaptive plasticity and niche expansion in an invasive thistle | 2015 | Turner et al. | Ecology and Evolution | rgbif |
paleobioDB: an R package for downloading, visualizing and processing data from the Paleobiology Database | 2014 | Varela et al. | Ecography | paleobioDB |
Variation in trait trade-offs allows differentiation among predefined plant functional types: implications for predictive ecology | 2015 | Verheijen et al. | New Phytol | rgbif |
speciesgeocodeR: An R package for linking species occurrences, user-defined regions and phylogenetic trees for biogeography, ecology and evolution | 2015 | Zizka & Antonelli | Cold Spring Harbor Laboratory | rgbif |
Long-lasting effects of land use history on soil fungal communities in second-growth tropical rain forests | 2016 | Bachelot et al. | Ecol Appl | taxize |
Tracking the history of an invasion: the freshwater croakers (Teleostei: Sciaenidae) in South America | 2014 | Boeger et al. | Zool Scr | rfishbase |
Prestoration: using species in restoration that will persist now and into the future | 2016 | Butterfield et al. | Restoration Ecology | rgbif |
Niche dynamics of alien species do not differ among sexual and apomictic flowering plants | 2015 | Dellinger et al. | New Phytol | rgbif |
Late Quaternary vegetation dynamics from central parts of the Madeira River in Brazil | 2015 | Feitosa et al. | Acta Botanica Brasilica | rgbif |
Climatological correlates of seed size in Amazonian forest trees | 2015 | Malhado et al. | Journal of Vegetation Science | rgbif |
A trait-based metric sheds new light on the nature of the body size-depth relationship in the deep sea | 2016 | Mindel et al. | J Anim Ecol | rfishbase |
Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families | 2013 | Miya et al. | PLoS ONE | rfishbase |
Dataset of Phenology of Mediterranean high-mountain meadows flora (Sierra Nevada, Spain | 2015 | Pérez-Luque et al. | PhytoKeys | taxize |
Synthetic datasets and community tools for the rapid testing of ecological hypotheses | 2015 | Poisot et al. | Ecography | taxize |
Phylogenetic insights into the history and diversification of fishes on reefs | 2015 | Price et al. | Coral Reefs | rfishbase |
geoknife: reproducible web-processing of large gridded datasets | 2015 | Read et al. | Ecography | ropensci, paleobioDB |
Climate seasonality limits leaf carbon assimilation and wood productivity in tropical forests | 2016 | Wagner et al. | Biogeosciences | taxize |
Evolutionary signals of symbiotic persistence in the legume–rhizobia mutualism | 2015 | Werner et al. | Proc Natl Acad Sci USA | rgbif |
Biogeo: an R package for assessing and improving data quality of occurrence record datasets | 2016 | Robertson et al. | Ecography | rgbif |
Phylogenetic systematics of leaffishes - Teleostei: Polycentridae, Nandidae | 2015 | Collins et al. | Journal of Zoological Systematics and Evolutionary Research | rfishbase |
Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism | 2015 | Davison et al. | Science | rgbif |
Pollen assemblage richness does not reflect regional plant species richness: a cautionary tale | 2013 | Goring et al. | Journal of Ecology | ritis |
Dynamics of Near-Coastal Fish Assemblages following the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico | 2015 | Schaefer et al. | Transactions of the American Fisheries Society | rfishbase |
MonoPhy : a simple R package to find and visualize monophyly issues | 2016 | Schwery & O’Meara | PeerJ Computer Science | taxize |
A quantitative synthesis of the importance of variables used in MaxEnt species distribution models | 2016 | Bradie & Leung | Journal of Biogeography | taxize |
Taxonomic similarity, more than contact opportunity, explains novel plant-pathogen associations between native and alien taxa | 2016 | Bufford et al. | New Phytol | taxize |
Semi-Automated Identification of Ontological Labels in the Biomedical Literature with goldi | 2016 | Cole et al. | Cold Spring Harbor Laboratory | pdftools |
Measures of biologically relevant environmental heterogeneity improve prediction of regional plant species richness | 2016 | Cramer & Verboom | Journal of Biogeography | taxize |
Plant Distribution Data Show Broader Climatic Limits than Expert-Based Climatic Tolerance Estimates | 2016 | Curtis & Bradley | PLOS ONE | rgbif |
Climate change will increase the naturalization risk from garden plants in Europe | 2016 | Dullinger et al. | Global Ecol | rgbif |
MetacodeR: An R package for manipulation and heat tree visualization of community taxonomic data from metabarcoding | 2016 | Foster et al. | Cold Spring Harbor Laboratory | taxize |
Is citizen science an open science in the case of biodiversity observations? | 2016 | Groom et al. | Journal of Applied Ecology | rgbif |
Using evolutionary tools to search for novel psychoactive plants | 2016 | Halse-Gramkow et al. | Plant Genetic Resources | taxize |
Climate Warming and Seasonal Precipitation Change Interact to Limit Species Distribution Shifts across Western North America | 2016 | Harsch & HilleRisLambers | PLOS ONE | geonames |
A study of institutional spending on open access publication fees in Germany | 2016 | Jahn & Tullney | PeerJ | rcrossref |
Evolutionary dynamics and biogeography of Musaceae reveal a correlation between the diversification of the banana family and the geological and climatic history of Southeast Asia | 2016 | Janssens et al. | New Phytol | rgbif |
Using the Crossref Metadata API to explore publisher content | 2016 | Lammey | Sci Ed | rcrossref, ropensci |
Positive biodiversity-productivity relationship predominant in global forests | 2016 | Liang et al. | Science | taxize |
The Propensity to Cycle Tool: An open source online system for sustainable transport planning | 2015 | Lovelace et al. | arXiv | stplanr |
rotl: an R package to interact with the Open Tree of Life data | 2016 | Michonneau et al. | Methods in Ecology and Evolution | rotl, traits |
Growth rings in tropical trees: role of functional traits, environment, and phylogeny | 2016 | Nath et al. | Trees | taxize |
Open Source Molecular Modeling | 2016 | Pirhadi et al. | Journal of Molecular Graphics and Modelling | webchem |
Adaptive evolution of seed oil content in angiosperms: accounting for the global patterns of seed oils | 2016 | Sanyal & Decocq | BMC Evolutionary Biology | rgbif |
Genome size variation and species diversity in salamander families | 2016 | Sclavi & Herrick | Cold Spring Harbor Laboratory | taxize |
Ciência Política na era do Big Data: automação na coleta de dados digitais | 2015 | Silva & Meireles | Politica Hoje | RSelenium |
Waking the undead: implications of a soft explosive model for the timing of placental mammal diversification | 2016 | Springer et al. | Molecular Phylogenetics and Evolution | paleobioDB |
CARMA revisited: an updated database of carbon dioxide emissions from power plants worldwide | 2012 | Ummel | Center for Global Development Working Paper | geonames |
Light enough to travel or wise enough to stay? Brain size evolution and migratory behaviour in birds | 2016 | Vincze | Evolution | taxize |
A review of software tools for spell-checking taxon names in vegetation databases | 2016 | Wagner | Journal of Vegetation Science | taxize |
Foliar nectar enhances plant–mite mutualisms: the effect of leaf sugar on the control of powdery mildew by domatia-inhabiting mites | 2016 | Weber et al. | Annals of Botany | taxize |
Achievements and challenges in the integration, reuse and synthesis of vegetation plot data | 2016 | Wiser | Journal of Vegetation Science | taxize |
BETYdb: a yield, trait, and ecosystem service database applied to second‐generation bioenergy feedstock production | 2017 | LeBauer et al. | GCB Bioenergy | traits |
RAINBIO: a mega-database of tropical African vascular plants distributions | 2016 | Gilles et al. | PhytoKeys | rgbif |
Despite phylogenetic effects, C3-C4 lineages bridge the ecological gap to C4 photosynthesis | 2016 | Lundgren & Christin | Journal of Experimental Botany | rgbif |
Comparing genome versus proteome-based identification of clinical bacterial isolates | 2016 | Galata et al. | Briefings in Bioinformatics | taxize |
Phenological shifts in hoverflies (Diptera: Syrphidae): linking measurement and mechanism | 2016 | Hassall et al. | Ecography | bold |
The Tao of open science for ecology | 2015 | Hampton et al. | Ecosphere | rentrez |
Integrative Computational and Experimental Approaches to Establish a Post-Myocardial Infarction Knowledge Map | 2014 | Nguyen et al. | PLoS Computational Biology | rentrez |
Do method and species lifestyle affect measures of maximum metabolic rate in fishes? | 2016 | Killen et al. | Journal of Fish Biology | rotl |
Species interactions in occurrence data for a community of tick-transmitted pathogens | 2016 | Estrada-Peña & Fuente | Scientific Data | rotl |
The Quality of Citations: Towards Quantifying Qualitative Impact in Social Science Research | 2016 | Bauer et al. | SSRN | fulltext, rcrossref |
Environmental Correlation Analysis for Genes Associated with Protection against Malaria | 2016 | Mackinnon et al. | Molecular Biology and Evolution | rsnps |
Visualizing GeoData with R | 2016 | Kolb | Austrian Journal of Statistics | geonames |
CARMA Revisited: An Updated Database of Carbon Dioxide Emissions from Power Plants Worldwide | 2012 | Ummel | CGD Working Paper | geonames |
Elevation alters ecosystem properties across temperate treelines globally | 2017 | Mayor et al. | Nature | brranching |
BIOMASS: An R Package for estimating aboveground biomass and its uncertainty in tropical forests | 2017 | Réjou-Méchain et al. | Methods in Ecology and Evolution | taxize |
Modelling the effects of environmental conditions on the acoustic occurrence and behaviour of Antarctic blue whales | 2017 | Shabangu et al. | PLOS ONE | rerddap |
Fish diversity in tidepools: assembling effects of environmental heterogeneity | 2017 | Bezerra et al. | Environmental Biology of Fishes | rfishbase |
Spatial distribution of environmental DNA in a nearshore marine habitat | 2017 | O’Donnell et al. | PeerJ | taxize |
Shotgun metagenomic sequencing reveals freshwater beach sands as reservoir of bacterial pathogens | 2017 | Mohiuddin et al. | Water Research | taxize |
Single locus genotyping to track Leishmania donovani in the Indian subcontinent: Application in Nepal | 2017 | Rai et al. | PLOS Neglected Tropical Diseases | rgbif |
Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding | 2017 | Andruszkiewicz et al. | PLOS ONE | taxize |
Adaptive sequence evolution is driven by biotic stress in a pair of orchid species (Dactylorhiza) with distinct ecological optima | 2017 | Balao et al. | Molecular Ecology | rgbif |
red - an R package to facilitate species red list assessments according to the IUCN criteria | 2017 | Cardoso | Biodiversity Data Journal | rredlist |
Habitat filtering not dispersal limitation shapes oceanic island floras: species assembly of the Galápagos archipelago | 2017 | Carvajal-Endara et al. | Ecology Letters | rgbif |
Ex situ conservation of plant diversity in the world’s botanic gardens | 2017 | Mounce et al. | Nature Plants | rgbif |
Challenging a bioinformatic tool’s ability to detect microbial contaminants using in silico whole genome sequencing data | 2017 | Olson et al. | PeerJ | taxize |
The role of trait combination in the conspicuousness of fruit display among bird-dispersed plants | 2017 | Ordano et al. | Functional Ecology | taxize |
Aligning marine species range data to better serve science and conservation | 2017 | O’Hara et al. | PLOS ONE | worrms |
The National Eutrophication Survey: lake characteristics and historical nutrient concentrations | 2017 | Stachelek et al. | Earth System Science Data Discussions | magick, tesseract |
A global database on freshwater fish species occurrence in drainage basins | 2017 | Tedesco et al. | Scientific Data | rfishbase |
Genome size in arthropods: different roles of phylogeny, habitat and life history in insects and crustaceans | 2017 | Alfsnes et al. | Ecology and Evolution | rgbif, spocc |
On the inconsistency of pollinator species traits for predicting either response to land-use change or functional contribution | 2017 | Bartomeus et al. | Oikos | taxize |
On the inconsistency of pollinator species traits for predicting either response to agricultural intensification or functional contribution | 2016 | Bartomeus et al. | Cold Spring Harbor Laboratory | taxize |
R Python, and Ruby clients for GBIF species occurrence data | 2017 | Chamberlain & Boettiger | PeerJ Preprints | rgbif |
The Spine of American Law: Digital Text Analysis and US Legal Practice | 2017 | Funk & Mullen | The American Historical Review | textreuse |
Using the 'rentrez' R Package to Identify Repository Records for NCBI LinkOut | 1279 | Lee et al. | Code4lib Journal | rentrez, ropensci |
A quantitative-PCR based method to estimate ranavirus viral load following normalisation by reference to an ultraconserved vertebrate target | 2017 | Leung et al. | Journal of Virological Methods | taxize |
A quantitative and statistical biological comparison of three semi-enclosed seas | 2017 | Ludt et al. | Marine Biodiversity | rgbif |
Taxonomic bias in animal behaviour publications | 2017 | Rosenthal et al. | Animal Behaviour | taxize |
Genome-Scale Architecture of Small Molecule Regulatory Networks and the Fundamental Trade-Off between Regulation and Enzymatic Activity | 2017 | Reznik et al. | Cell Reports | taxize |
Tracking Invasive Alien Species (TrIAS): Building a data-driven framework to inform policy | 2017 | Vanderhoeven et al. | Research Ideas and Outcomes | rgbif, spocc |
A distribution and taxonomic reference dataset of Geranium in the New World | 2017 | Aedo & Pando | Scientific Data | rgbif |
Amazon plant diversity revealed by a taxonomically verified species list | 2017 | Cardoso et al. | Proceedings of the National Academy of Sciences | rgbif |
Barriers to globally invasive species are weakening across the Antarctic | 2017 | Duffy et al. | Diversity and Distributions | rgbif |
Trait shifts associated with the subshrub life-history strategy in a tropical savanna | 2017 | Giroldo et al. | Oecologia | brranching |
Environmental correlates of biome-level floristic turnover in South Africa | 2017 | Power et al. | Journal of Biogeography | taxize |
Quantifying the influence of urban land use on mangrove biology and ecology: A meta-analysis | 2017 | Branoff | Global Ecology and Biogeography | taxize |
The Future Species of Anthropocene Seas | 2017 | Dulvy & Kindsvater | Conservation for the Anthropocene Ocean | rfishbase |
Multilocus phylogeny and statistical biogeography clarify the evolutionary history of major lineages of turtles | 2017 | Pereira et al. | Molecular Phylogenetics and Evolution | rgbif |
A new species of Telipogon (Oncidiinae: Orchidaceae) from the paramos of Colombia | 2017 | Pérez-Escobar et al. | Phytotaxa | spocc |
Testing the association of phenotypes with polyploidy: An example using herbaceous and woody eudicots | 2017 | Zenil-Ferguson et al. | Evolution | chromer |
GSODR: Global Summary Daily Weather Data in R | 2017 | Sparks et al. | The Journal of Open Source Software | GSODR |
Signatures of the collapse and incipient recovery of an overexploited marine ecosystem | 2017 | Pedersen et al. | Royal Society Open Science | rfishbase |
Evaluating two freely available geocoding tools for geographical inconsistencies and geocoding errors | 2017 | Singh | Open Geospatial Data, Software and Standards | helminthR |
rentrez: An R package for the NCBI eUtils API (Version 1 | 2017 | Winter | PeerJ Preprints | rentrez |
Distribution and diversity of enzymes for polysaccharide degradation in fungi | 2017 | Berlemont | Scientific Reports | taxize |
Species are not most abundant in the centre of their geographic range or climatic niche | 2017 | Dallas et al. | Ecology Letters | spocc, taxize |
Cophylogenetic signal is detectable in pollination interactions across ecological scales | 2017 | Hutchinson et al. | Ecology | taxize |
Pathogenic helminths in the past: Much ado about nothing | 2017 | Mulder | F1000Research | helminthR |
Integrating lipid storage into general representations of fish energetics | 2017 | Martin et al. | Journal of Animal Ecology | rfishbase |
Naturalization of ornamental plant species in public green spaces and private gardens | 2017 | Mayer et al. | Biological Invasions | rgbif |
Skull shape reflects prey size niche in toothed whales | 2017 | McCurry et al. | Biological Journal of the Linnean Society | rfishbase |
Geographical variation in the foraging behaviour of the pantropical red-footed booby | 2017 | Mendez et al. | Marine Ecology Progress Series | rerddap |
Species pool distributions along functional trade-offs shape plant productivity–diversity relationships | 2017 | Chalmandrier et al. | Scientific Reports | rgbif, taxize |
Repetitive prefix in Agul: Morphological copy from a closely related language | 2017 | Maisak | International Journal of Bilingualism | lingtypology |
Cophylogenetic assessment of New World warblers (Parulidae) and their symbiotic feather mites (Proctophyllodidae | 2017 | Matthews et al. | Journal of Avian Biology | rotl |
High dimensional Single Index Bayesian Modeling of the Brain Atrophy over time | 2017 | Roy et al. | arXiv | rsnps |
| 2017 | Drost et al. | Bioinformatics | biomartr, taxize |
Tree seedling vitality improves with functional diversity in a Mediterranean common garden experiment | 2018 | Peer et al. | Forest Ecology and Management | brranching |
tidyhydat: Extract and Tidy Canadian Hydrometric Data | 2017 | Albers | The Journal of Open Source Software | tidyhydat |
Varieties of Melampyrum Lineare (Orobanchaceae) Revisited | 2017 | Oldham & Weeks | Rhodora | spocc |
PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures | 2018 | Krawczyk et al. | Nucleic Acids Research | rentrez |
Big data of tree species distributions: how big and how good? | 2017 | Serra-Diaz et al. | Forest Ecosystems | rgbif |
Work Engagement among Rescue Workers: Psychometric Properties of the Portuguese UWES | 2018 | Sinval et al. | Frontiers in Psychology | skimr |
Most species are not limited by an Amazonian river postulated to be a border between endemism areas | 2018 | Santorelli et al. | Scientific Reports | rotl |
Seed-dispersal interactions in fragmented landscapes - a metanetwork approach | 2018 | Emer et al. | Ecology Letters | taxize |
Patterns of microsatellite distribution reflect the evolution of biological complexity | 2018 | Surabhi et al. | Cold Spring Harbor Laboratory | taxize |
Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes | 2018 | Khorramdelazad et al. | BMC Genomics | taxize |
A transcript-wide association study in physical activity intervention implicates molecular pathways in chronic disease | 2018 | Claypool & Patel | Cold Spring Harbor Laboratory | rentrez |
Modelling air pollution, climate and health data using Bayesian Networks: a case study of the English regions | 2018 | Vitolo et al. | Earth and Space Science | rdefra |
Scraping Financial Data from the Web Using R Language | 2018 | Krotov & Tennyson | Journal of Emerging Technologies in Accounting | pdftools |
SecretSanta: flexible pipelines for functional secretome prediction | 2018 | Gogleva et al. | Bioinformatics | biomartr |
miRToolsGallery: a tag-based and rankable microRNA bioinformatics resources database portal | 2018 | Chen et al. | Database | rentrez |
Link prediction for interdisciplinary collaboration via co-authorship network | 2018 | Cho & Yu | arXiv | rcrossref |
Intraspecific and interspecific adaptive latitudinal cline in Brassicaceae seed oil traits | 2018 | Sanyal et al. | American Journal of Botany | rgbif |
BioDataome: a collection of uniformly preprocessed and automatically annotated datasets for data-driven biology | 2018 | Lakiotaki et al. | Database | rentrez |
New formula and conversion factor to compute tree species basic wood density from a global wood technology database | 2018 | Vieilledent et al. | Cold Spring Harbor Laboratory | taxize |
Taxa: An R package implementing data standards and methods for taxonomic data | 2018 | Foster et al. | F1000Research | taxa, taxize |
A meta-analysis of birth-origin effects on reproduction in diverse captive environments | 2018 | Farquharson et al. | Nature Communications | rotl |
Filter-dispersal assembly of lowland Neotropical rainforests across the Andes | 2018 | Bemmels et al. | Ecography | rgbif, brranching |
Systematic Functional Annotation of Somatic Mutations in Cancer | 2018 | Ng et al. | Cancer Cell | biomartr |
GlobTherm, a global database on thermal tolerances for aquatic and terrestrial organisms | 2018 | Bennett et al. | Scientific Data | taxize |
Nomenclature instability in species culturomic assessments: Why synonyms matter | 2018 | Correia et al. | Ecological Indicators | taxize |
GeneXX: An online tool for the exploration of transcript changes in skeletal muscle associated with exercise | 2018 | Reibe et al. | Physiological Genomics | rentrez |
Brazil-Portugal Transcultural Adaptation of the UWES-9: Internal Consistency, Dimensionality, and Measurement Invariance | 2018 | Sinval et al. | Frontiers in Psychology | skimr |
Development of quantitative screen for 1550 chemicals with GC-MS | 2018 | Bergmann et al. | Analytical and Bioanalytical Chemistry | webchem |
ijtiff: An R package providing TIFF I/O for ImageJ users | 2018 | Nolan & Padilla-Parra | Journal of Open Source Software | ijtiff |
MicroRNA&ndash,mRNA expression profiles associated with medulloblastoma subgroup 4 | 2018 | Gershanov et al. | Cancer Management and Research | iheatmapr |
Zenodo in the Spotlight of Traditional and New Metrics | 2017 | Peters et al. | Frontiers in Research Metrics and Analytics | oai |
visdat: Visualising Whole Data Frames | 2017 | Tierney | The Journal of Open Source Software | visdat |
Fast, Consistent Tokenization of Natural Language Text | 2018 | Mullen et al. | Journal of Open Source Software | tokenizers, textreuse |
Niche conservatism and the invasive potential of the wild boar | 2017 | Sales et al. | Journal of Animal Ecology | spocc |
Multivariate skeletal analyses support a taxonomic distinction between New Zealand and Australian Eudyptula penguins (Sphenisciformes: Spheniscidae | 2017 | Grosser et al. | Emu - Austral Ornithology | rnoaa |
Arthropod and oligochaete assemblages from grasslands of the southern Kenai Peninsula, Alaska | 2017 | Bowser et al. | Biodiversity Data Journal | bold |
Disparities in second-generation DNA metabarcoding results exposed with accessible and repeatable workflows | 2018 | Divoll et al. | Molecular Ecology Resources | bold |
Illuminating prey selection in an insectivorous bat community exposed to artificial light at night | 2017 | Cravens et al. | Journal of Applied Ecology | bold |
Missing the point: are journals using the ideal number of decimal places? | 2018 | Barnett | F1000Research | rentrez |
Natural history bycatch: a pipeline for identifying metagenomic sequences in RADseq data | 2018 | Holmes & Davis Rabosky | PeerJ | taxize |
Quantitative Falsification for Qualitative Findings | 2018 | Pajo | Social Science Computer Review | tokenizers |
Down-sizing of dung beetle assemblages over the last 53 000 years is consistent with a dominant effect of megafauna losses | 2018 | Schweiger & Svenning | Oikos | rgbif |
Miniaturisation of biologgers is not alleviating the 5% rule | 2018 | Portugal & White | Methods in Ecology and Evolution | rotl |
Comparative transcriptomics and genomic patterns of discordance in Capsiceae (Solanaceae | 2018 | Spalink et al. | Molecular Phylogenetics and Evolution | rentrez |
Seasonal dynamics of typhoid and paratyphoid fever | 2018 | Saad et al. | Scientific Reports | rgbif |
miRCancerdb: a database for correlation analysis between microRNA and gene expression in cancer | 2018 | Ahmed et al. | BMC Research Notes | cRegulome |
Effects of nettle slurry (Urtica dioica L | 2018 | Garmendia et al. | PeerJ | writexl |
Drivers and rates of stock assessments in the United States | 2018 | Neubauer et al. | PLOS ONE | rfishbase |
A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications | 2018 | Han et al. | PLOS ONE | rentrez |
Fish reproductive-energy output increases disproportionately with body size | 2018 | Barneche et al. | Science | rotl |
Suppdata: Downloading Supplementary Data from Published Manuscripts | 2018 | Pearse et al. | Journal of Open Source Software | suppdata |
Refining area of occupancy to address the modifiable areal unit problem in ecology and conservation. Conservation Biology | 2018 | Moat et al. | Conservation Biology | rredlist |
One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon | 2018 | Machado et al. | Scientific Reports | rentrez |
Genomic atlas of the human plasma proteome | 2018 | Sun et al. | Nature | rentrez, plotly |
snpEnrichR: analyzing co-localization of SNPs and their proxies in genomic regions | 2018 | Nousiainen et al. | Bioinformatics | RSelenium |
Machine learning techniques for the automation of literature reviews and systematic reviews in EFSA | 2018 | Jaspers et al. | EFSA Supporting Publications | aRxiv, rbhl, rcrossref, rdatacite, rplos |
Global drivers of reef fish growth | 2018 | Morais & Bellwood | Fish and Fisheries | rotl |
A stromal cell population that inhibits adipogenesis in mammalian fat depots | 2018 | Schwalie et al. | Nature | biomartr |
Nature’s untold stories: an overview on the availability and type of on-line data on long-term biodiversity monitoring | 2018 | Ondei et al. | Biodiversity and Conservation | taxize |
Instances of erroneous DNA barcoding of metazoan invertebrates: Are universal cox1 gene primers too “universal”? | 2018 | Mioduchowska et al. | PLOS ONE | rentrez |
Text Analytics Techniques in the Digital World: a Sentiment Analysis Case Study of the Coverage of Climate Change on US News Networks | 2018 | Casey | Irish Communication Review | tokenizers |
Distributional Patterns and Ecological Determinants of Bat Occurrence Inside Caves: A Broad Scale Meta-Analysis | 2018 | De Oliveira et al. | Diversity | rgbif |
Abstract 4643: Drug-Target Explorer: An interactive tool for examining chemical-biological interactions | 2018 | Allaway et al. | Cancer Chemistry | webchem |
Restoration Provides Hope for Faunal Recovery: Changes in Primate Abundance Over 45 Years in Kibale National Park, Uganda | 2018 | Chapman et al. | Tropical Conservation Science | rnaturalearth |
Optimizing community trees using the open tree of life increases the reliability of phylogenetic diversity and dispersion indices | 2018 | Gastauer et al. | Ecological Informatics | rotl, brranching |
Distribution and ecological segregation on regional and microgeographic scales of the diploid Centaurea aspera L., the tetraploid C. seridis L., and their triploid hybrids (Compositae | 2018 | Garmendia et al. | PeerJ | writexl |
Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum | 2018 | Ruiz et al. | Nucleic Acids Research | iheatmapr |
Allometric and trait-based patterns in parasite stoichiometry | 2018 | Paseka & Grunberg | Oikos | rotl |
DataPackageR: Reproducible data preprocessing, standardization and sharing using R/Bioconductor for collaborative data analysis | 2018 | Finak et al. | Gates Open Research | DataPackageR |
Vulnerability to snakebite envenoming: a global mapping of hotspots | 2018 | Longbottom et al. | The Lancet | spocc |
Evolutionary dynamics of host specialization in wood-decay fungi | 2018 | Krah et al. | BMC Evolutionary Biology | rusda |
Fish community and single-species indicators provide evidence of unsustainable practices in a multi-gear reef fishery | 2018 | Babcock et al. | Fisheries Research | rfishbase |
Alcohol Expectancy-Adolescent Questionnaire (AEQ-AB): Validation for portuguese college students | 2018 | Almeida et al. | Health and Addictions/Salud y Drogas | skimr |
Locating similar names through locality sensitive hashing and graph theory | 2018 | García et al. | Multimedia Tools and Applications | textreuse |
Olfactory-cued navigation in shearwaters: linking movement patterns to mechanisms | 2018 | Abolaffio et al. | Scientific Reports | rerddap |
Better late than never: a synthesis of strategic land retirement and restoration in California | 2018 | Lortie et al. | Ecosphere | rgbif |
Challenges to fisheries advice and management due to stock recovery | 2018 | Van Gemert & Andersen | ICES Journal of Marine Science | rfishbase |
Breakdown of brain–body allometry and the encephalization of birds and mammals | 2018 | Tsuboi et al. | Nature Ecology & Evolution | taxize |
Mapping the potential distributions of etiological agent, vectors, and reservoirs of Japanese Encephalitis in Asia and Australia | 2018 | Samy et al. | Acta Tropica | spocc |
Ecosystem type shapes trophic position and omnivory in fishes | 2018 | Sánchez-Hernández & Amundsen | Fish and Fisheries | rfishbase |
Google Scholar, Web of Science, and Scopus: a systematic comparison of citations in 252 subject categories | 2018 | Martín-Martín et al. | arXiv | cld2 |
Functional rarity of coral reef fishes at the global scale: Hotspots and challenges for conservation | 2018 | Grenié et al. | Biological Conservation | taxize |
Barcoding of Chrysomelidae of Euro-Mediterranean area: efficiency and problematic species | 2018 | Magoga et al. | Scientific Reports | rentrez |
Digitally Analyzing the Uneven Ground: Language Borrowing Among Indian Treaties | 2018 | Catalano | Current Research in Digital History | textreuse |
Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa | 2018 | Cano et al. | Parasites & Vectors | opencage |
Systematic pharmacological screens uncover novel pathways involved in cerebral cavernous malformations | 2018 | Otten et al. | EMBO Molecular Medicine | rentrez |
The effect of large sample sizes on ecological niche models: Analysis using a North American rodent, Peromyscus maniculatus | 2018 | Boria & Blois | Ecological Modelling | rgbif |
Why are woody plants fleshy-fruited at low elevations? Evidence from a high-elevation oceanic island | 2018 | Albert et al. | Journal of Vegetation Science | brranching |
A global assessment of tourism and recreation conservation threats to prioritise interventions | 2018 | Lusseau & Mancini | arXiv | rredlist, rgbif |
Global environmental drivers of marine fish egg size | 2018 | Barneche et al. | Global Ecology and Biogeography | rotl |
Expanding tidy data principles to facilitate missing data exploration, visualization and assessment of imputations | 2018 | Tierney & Cook | arXiv | visdat |
Phosphoproteomic-based kinase profiling early in influenza virus infection identifies GRK2 as antiviral drug target | 2018 | Yángüez et al. | Nature Communications | rentrez |
Biodiversity hotspots are not congruent with conservation areas in the Gulf of California | 2018 | Morzaria-Luna et al. | Biodiversity and Conservation | taxize |
Implications of Simulating Global Digital Elevation Models for Flood Inundation Studies | 2018 | Hawker et al. | Water Resources Research | osmdata |
Habitat suitability estimated by niche models is largely unrelated to species abundance | 2018 | Dallas & Hastings | Global Ecology and Biogeography | rgbif, scrubr |
Text Mining and Big Data Analysis in the Relational Database with R | 2018 | Gye-Soo | International Journal of Trend in Research and Development | tokenizers |
Maternal Testosterone and Offspring Sex-Ratio in Birds and Mammals: A Meta-Analysis | 2017 | Merkling et al. | Evolutionary Biology | rotl |
malariaAtlas: an R interface to global malariometric data hosted by the Malaria Atlas Project | 2018 | Pfeffer et al. | Malaria Journal | spocc |
A Survey of e-Biodiversity: Concepts, Practices, and Challenges | 2018 | Gadelha Jr et al. | arXiv | rgbif |
Stable random projection: lightweight, general-purpose dimensionality reduction for digitized libraries | 2018 | Schmidt | Journal of Cultural Analytics | textreuse |
Handling stress and sample storage are associated with weaker complement-mediated bactericidal ability in birds but not bats | 2018 | Becker et al. | Physiological and Biochemical Zoology | rotl |
Methodological issues in the study of word stress correlates | 2017 | Roettger & Gordon | Linguistics Vanguard | lingtypology |
New formula and conversion factor to compute basic wood density of tree species using a global wood technology database | 2018 | Vieilledent et al. | American Journal of Botany | taxize |
Changing station coverage impacts temperature trends in the Upper Colorado River Basin | 2018 | McAfee et al. | International Journal of Climatology | FedData |
The rise of the Andes promoted rapid diversification in Neotropical Phlegmariurus (Lycopodiaceae | 2018 | Testo et al. | New Phytologist | rgbif |
Phylogenetic patterns and phenotypic profiles of the species of plants and mammals farmed for food | 2018 | Milla et al. | Nature Ecology & Evolution | taxize, rgbif, CoordinateCleaner |
Temporal and geographic distribution of weather conditions favorable to airborne spread of foot-and-mouth disease in the coterminous United States | 2018 | Hagerman et al. | Preventive Veterinary Medicine | riem |
Two methods for mapping and visualizing associated data on phylogeny using ggtree | 2018 | Yu et al. | Molecular Biology and Evolution | treeio |
The Arctic Traits Database: A repository of arctic benthic invertebrate traits | 2018 | Degen & Faulwetter | Earth System Science Data Discussions | rfishbase |
The impact of intraspecific variation on food web structure | 2018 | Clegg et al. | Ecology | worrms |
ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations | 2018 | Kandlikar et al. | F1000Research | taxize |
A global test of ecoregions | 2018 | Smith et al. | Nature Ecology & Evolution | rgbif |
Persistence of environmental DNA in marine systems | 2018 | Collins et al. | Communications Biology | rgbif, rentrez |
Imaging natural history museum collections from the bottom up: 3D print technology facilitates imaging of fluid-stored arthropods with flatbed scanners | 2018 | Mendez et al. | ZooKeys | magick |
The evolution of language families is shaped by the environment beyond neutral drift | 2018 | Bentz et al. | Nature Human Behaviour | rgbif |
Mapping knowledge gaps in marine diversity reveals a latitudinal gradient of missing species richness | 2018 | Menegotto & Rangel | Nature Communications | rgbif |
MODIStsp : An R package for automatic preprocessing of MODIS Land Products time series | 2016 | Busetto & Ranghetti | Computers & Geosciences | MODIStsp |
A Remote Sensing Approach for Regional-Scale Mapping of Agricultural Land-Use Systems Based on NDVI Time Series | 2017 | Bellón et al. | Remote Sensing | MODIStsp |
Climatic fluctuations and malaria transmission dynamics, prior to elimination, in Guna Yala, República de Panamá | 2018 | Hurtado et al. | Malaria Journal | MODIStsp |
Assessment of Water Management Changes in the Italian Rice Paddies from 2000 to 2016 Using Satellite Data: A Contribution to Agro-Ecological Studies | 2018 | Ranghetti et al. | Remote Sensing | MODIStsp |
Improved regional-scale Brazilian cropping systems’ mapping based on a semi-automatic object-based clustering approach | 2018 | Bellón et al. | International Journal of Applied Earth Observation and Geoinformation | MODIStsp |
Estimating inter-annual variability in winter wheat sowing dates from satellite time series in Camargue, France | 2017 | Manfron et al. | International Journal of Applied Earth Observation and Geoinformation | MODIStsp |
CropPhenology: An R package for extracting crop phenology from time series remotely sensed vegetation index imagery | 2018 | Araya et al. | Ecological Informatics | MODIStsp |
Variability of Satellite Derived Phenological Parameters across Maize Producing Areas of South Africa | 2018 | Adisa et al. | Sustainability | MODIStsp |
Conceptual Architecture and Service-Oriented Implementation of a Regional Geoportal for Rice Monitoring | 2017 | Granell et al. | ISPRS International Journal of Geo-Information | MODIStsp |
PhenoRice: A method for automatic extraction of spatio-temporal information on rice crops using satellite data time series | 2017 | Boschetti et al. | Remote Sensing of Environment | MODIStsp |
A Weekly Indicator of Surface Moisture Status from Satellite Data for Operational Monitoring of Crop Conditions | 2017 | Nutini et al. | Sensors | MODIStsp |
Conducting social network analysis with animal telemetry data: applications and methods using spatsoc | 2018 | Robitaille et al. | Cold Spring Harbor Laboratory | spatsoc |
Relation of El Niño and La Niña phenomena to precipitation, evapotranspiration and temperature in the Amazon basin | 2019 | Moura et al. | Science of The Total Environment | MODIStsp |
Historical collections as a tool for assessing the global pollination crisis | 2018 | Bartomeus et al. | Philosophical Transactions of the Royal Society B: Biological Sciences | taxize, rgbif |
Susceptibility of European freshwater fish to climate change: species profiling based on life-history and environmental characteristics | 2018 | Jarić et al. | Global Change Biology | rfishbase |
Physiological and pathophysiological characteristics of ataxin-3 isoforms | 2018 | Weishäupl et al. | Journal of Biological Chemistry | magick |
Botanic gardens are an untapped resource for studying the functional ecology of tropical plants | 2018 | Perez et al. | Philosophical Transactions of the Royal Society B: Biological Sciences | spocc |
Description of Cardiological Apps From the German App Store: Semiautomated Retrospective App Store Analysis | 2018 | Albrecht et al. | JMIR mHealth and uHealth | cld2 |
Insect repellent and chemical agronomic treatments to reduce seed number in 'Afourer' mandarin - Effect on yield and fruit diameter | 2019 | Garmendia et al. | Scientia Horticulturae | writexl |
Population Dynamics of Anopheles albimanus (Diptera: Culicidae) at Ipetí-Guna, a Village in a Region Targeted for Malaria Elimination in Panamá | 2018 | Hurtado et al. | Insects | MODIStsp |
Managing Larger Data on a GitHub Repository | 2018 | Boettiger | Journal of Open Source Software | piggyback |
rcites: An R package to access the CITES Speciesplus database | 2018 | Geschke et al. | Journal of Open Source Software | rcites |
Hotel booking demand datasets | 2018 | António et al. | Data in Brief | skimr |
Reef fish functional traits evolve fastest at trophic extremes | 2018 | Borstein et al. | Nature Ecology & Evolution | rfishbase |
Enhancer Architecture and Essential Core Regulatory Circuitry of Chronic Lymphocytic Leukemia | 2018 | Ott et al. | Cancer Cell | iheatmapr |
DataDepsGenerators.jl: making reusing data easy by automatically generating DataDeps.jl registration code | 2018 | White & Santy | Journal of Open Source Software | ckanr, rdryad, rfigshare, rdatacite |
Conventional methods for enhancing connectivity in conservation planning do not always maintain gene flow | 2018 | Hanson et al. | Journal of Applied Ecology | rgbif |
Accumulation processes of trace metals into Arctic sea ice: distribution of Fe, Mn and Cd associated with ice structure | 2018 | Evans & Nishioka | Marine Chemistry | magick |
| 2018 | Sinval et al. | Current Psychology | skimr |
Predicting plant conservation priorities on a global scale | 2018 | Pelletier et al. | Proceedings of the National Academy of Sciences | taxize |
Assessing the Conservation Potential of Fish and Corals in Aquariums Globally | 2018 | Da Silva et al. | Journal for Nature Conservation | taxize |
Impacts of landscape composition, marginality of distribution, soil fertility, and climatic stability on the patterns of woody plant endemism in the Cerrado | 2018 | Vidal et al. | Cold Spring Harbor Laboratory | rgbif |
Improving consumption based accounting for global capture fisheries | 2018 | West et al. | Journal of Cleaner Production | rfishbase |
4-Fluoramphetamine in the Netherlands: Text-mining and sentiment analysis of internet forums | 2019 | Blankers et al. | International Journal of Drug Policy | RSelenium |
Developmental temperature affects phenotypic means and variability: a meta-analysis of fish data | 2018 | O’Dea et al. | Center for Open Science | rotl |
SKYNET: An R package for generating air passenger networks for urban studies | 2018 | Teixeira & Derudder | Urban Studies | skynet |
Differential ratio amplicons (Ramp) for the evaluation of RNA integrity extracted from complex environmental samples | 2018 | Cholet et al. | Environmental Microbiology | rentrez |
GeneHummus: A pipeline to define gene families and their expression in legumes and beyond | 2018 | Die et al. | Cold Spring Harbor Laboratory | rentrez |
Construction and evaluation of a robust trophic network model for the northern Gulf of Mexico ecosystem | 2019 | Leaf & Oshima | Ecological Informatics | rfishbase |
Litter decomposition driven by soil fauna, plant diversity and soil management in urban gardens | 2018 | Tresch et al. | Science of The Total Environment | rotl |
Software for analysis of vegetation indices dynamics | 2018 | Sodnomov et al. | IOP Conference Series: Earth and Environmental Science | MODIStsp |
pavo 2: new tools for the spectral and spatial analysis of colour in R | 2018 | Maia et al. | Cold Spring Harbor Laboratory | magick |
A case study in text mining of discussion forum posts: classification with bag of words and global vectors Int | 2018 | Cichosz | J. Appl. Math. Comput. Sci | hunspell |
Detection of bacterial endosymbionts in freshwater crustaceans: the applicability of non-degenerate primers to amplify the bacterial 16S rRNA gene | 2018 | Mioduchowska et al. | PeerJ | rentrez |
Data on the conservation potential of fish and coral populations in aquariums | 2018 | Da Silva & Conde | Data in Brief | taxize |
Genome size variation and species diversity in salamanders | 2018 | Sclavi & Herrick | Journal of Evolutionary Biology | taxize |
Niche divergence and limits to expansion in the high polyploid Dianthus broteri complex | 2018 | López-Jurado et al. | New Phytologist | rgbif |
Rarity of Size-Assortative Mating in Animals: Assessing the Evidence with Anuran Amphibians | 2019 | Green | The American Naturalist | rotl |
The covariance between metabolic rate and behaviour varies across behaviours and thermal types: meta-analytic insights | 2018 | Mathot et al. | Biological Reviews | rotl |
restez: Create and Query a Local Copy of GenBank in R | 2018 | Bennett et al. | Journal of Open Source Software | rentrez, restez |
hydroscoper: R interface to the Greek National Data Bank for Hydrological and Meteorological Information | 2018 | Vantas | Journal of Open Source Software | hydroscoper |
EyeChrom and CCDBcurator: Visualizing chromosome count data from plants | 2019 | Rivero et al. | Applications in Plant Sciences | chromer |
Agricultural landscape generators for simulation models: A review of existing solutions and an outline of future directions | 2019 | Langhammer et al. | Ecological Modelling | landscapetools, NLMR |
The politeness Package: Detecting Politeness in Natural Language | 2018 | Yeomans et al. | The R Journal | hunspell |
Phylogeography, population genetics, and distribution modeling reveal vulnerability of Scirpus longii (Cyperaceae) and the Atlantic Coastal Plain Flora to climate change | 2019 | Spalink et al. | Molecular Ecology | rgbif |
A Curated, Comprehensive Database of Plasmid Sequences | 2019 | Brooks et al. | Microbiology Resource Announcements | rentrez |
A joint text mining-rank size investigation of the rhetoric structures of the US Presidents’ speeches | 2019 | Ficcadenti et al. | Expert Systems with Applications | tokenizers |
A synthesis of animal-mediated seed dispersal of palms reveals distinct biogeographical differences in species interactions | 2019 | Muñoz et al. | Journal of Biogeography | taxize |
The unknown followers: Discovery of a new species of Sycobia Walker (Hymenoptera: Epichrysomallinae) associated with Ficus benjamina L (Moraceae) in the Neotropical region | 2018 | Farache et al. | Journal of Hymenoptera Research | rnaturalearth |
Linking life-history theory and metabolic theory explains the offspring size-temperature relationship | 2019 | Pettersen et al. | Ecology Letters | rotl |
stats19: A package for working with open road crash data | 2019 | Lovelace et al. | Journal of Open Source Software | stplanr |
The importance of soils in predicting the future of plant habitat suitability in a tropical forest | 2019 | Zuquim et al. | Plant and Soil | spocc |
Distinct gut virome profile of pregnant women with type 1 diabetes in the ENDIA study | 2019 | Kim et al. | Open Forum Infectious Diseases | iheatmapr |
REDLISTR: Tools for the IUCN Red Lists of Ecosystems and Threatened Species in R | 2019 | Lee et al. | Ecography | rgbif |
rMyCoPortal - an R package to interface with the Mycology Collections Portal | 2019 | Krah et al. | Biodiversity Data Journal | RSelenium |
Biodiversity Observations Miner: A web application to unlock primary biodiversity data from published literature | 2019 | Muñoz et al. | Biodiversity Data Journal | taxize |
Metabolic rates of prokaryotic microbes may inevitably rise with global warming | 2019 | Smith et al. | Cold Spring Harbor Laboratory | taxize |
Extreme winter warm event causes exceptionally early bud break for many woody species | 2019 | Ladwig et al. | Ecosphere | rgbif |
Evolutionary pathways toward gigantism in sharks and rays | 2019 | Pimiento et al. | Evolution | rfishbase |
Terrestrial locomotion energy costs vary considerably between species: no evidence that this is explained by rate of leg force production or ecology | 2019 | Halsey & White | Scientific Reports | rotl |
Investigating the association between mating-relevant self-concepts and mate preferences through a data-driven analysis of online personal descriptions | 2019 | Lee et al. | Center for Open Science | RSelenium, hunspell |
Global plant–symbiont organization and emergence of biogeochemical cycles resolved by evolution-based trait modelling | 2019 | Lu & Hedin | Nature Ecology & Evolution | rgbif |
CoordinateCleaner: standardized cleaning of occurrence records from biological collection databases | 2019 | Zizka et al. | Methods in Ecology and Evolution | opencage, CoordinateCleaner, rgbif, rnaturalearth, scrubr |
The global biogeography of polyploid plants | 2019 | Rice et al. | Nature Ecology & Evolution | CoordinateCleaner, rgbif, rnaturalearthdata |
Plant DNA-barcode library and community phylogeny for a semi-arid East African savanna | 2019 | Gill et al. | Molecular Ecology Resources | brranching |
Network analysis to evaluate the impact of research funding on research community consolidation | 2019 | Hicks et al. | Cold Spring Harbor Laboratory | rcrossref |
Improving the detection of wildfire disturbances in space and time based on indicators extracted from MODIS data: a case study in northern Portugal | 2019 | Marcos et al. | International Journal of Applied Earth Observation and Geoinformation | MODIStsp |
Malaria infection rates in Anopheles albimanus (Diptera: Culicidae) at Ipetí-Guna, a village within a region targeted for malaria elimination in Panamá | 2019 | Rigg et al. | Infection, Genetics and Evolution | MODIStsp |
SpNetPrep: An R package using Shiny to facilitate spatial statistics on road networks | 2019 | Briz-Redón | Research Ideas and Outcomes | osmdata |
Does the Asset Pricing Premium Reflect Asymmetric or IncompleteInformation? | 2018 | Liu et al. | Economics Faculty Working Papers Series | hunspell |
A season for all things: Phenological imprints in Wikipedia usage and their relevance toconservation | 2019 | Mittermeier & NA | PLoS Biology | rgbif, rebird |
Trends and perspectives on the use of animal social network analysis in behavioural ecology: a bibliometric approach | 2019 | Webber & Vander Wal | Animal Behaviour | spatsoc |
Spatial overlaps between the global protected areas network and terrestrial hotspots of evolutionary diversity | 2019 | Daru et al. | Global Ecology and Biogeography | rgbif |
Phylogenetic investigation of skin sloughing rates in frogs: relationships with skin characteristics and disease-driven declines | 2019 | Ohmer et al. | Proceedings of the Royal Society B: Biological Sciences | rotl |
Patterns of microsatellite distribution across eukaryotic genomes | 2019 | Srivastava et al. | BMC Genomics | taxize |
A benchmark dataset of herbarium specimen images with label data | 2019 | Dillen et al. | Biodiversity Data Journal | rgbif |
Identifying historic river ice breakup timing using MODIS and Google Earth Engine in support of operational flood monitoring in Northern Ontario | 2019 | Beaton et al. | Remote Sensing of Environment | tidyhydat |
Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropods | 2019 | Thomsen & Sigsgaard | Ecology and Evolution | taxize |
Contemporary climatic analogs for 540 North American urban areas in the late 21st century | 2019 | Fitzpatrick & Dunn | Nature Communications | rnoaa |
Land-Cover Pattern and Change | 2018 | Fletcher & Fortin | Spatial Ecology and Conservation Modeling | NLMR |
Postglacial vegetation, fire, and climate history along the eastern Andes, Argentina and Chile (lat. 41–55°S | 2019 | Nanavati et al. | Quaternary Science Reviews | neotoma |
Why tree lines are lower on islands-Climatic and biogeographic effects hold the answer | 2019 | Karger et al. | Global Ecology and Biogeography | CoordinateCleaner |
The Prevalence of Marginally Significant Results in Psychology Over Time | 2019 | Olsson-Collentine et al. | Psychological Science | rcrossref |
Taxonomic and geographic bias in the genetic study of helminth parasites | 2019 | Poulin et al. | International Journal for Parasitology | rentrez |
A time travel story: metagenomic analyses decipher the unknown geographical shift and the storage history of possibly smuggled antique marble statues | 2019 | Piñar et al. | Annals of Microbiology | rgbif |
Ligustrum lucidum W. T. Aiton (broad-leaf privet) demonstrates climatic niche shifts during global-scale invasion | 2019 | Dreyer et al. | Scientific Reports | rgbif |
Genomic, ecological, and morphological approaches to investigating species limits: A case study in modern taxonomy from Tropical Eastern Pacific surgeonfishes | 2019 | Ludt et al. | Ecology and Evolution | rgbif |
Impacts of historical warming on marine fisheries production | 2019 | Free et al. | Science | rfishbase |
Bat Research Networks and Viral Surveillance: Gaps and Opportunities in Western Asia | 2019 | Phelps et al. | Viruses | rentrez |
| 2019 | Mitchell & Moseley | Cold Spring Harbor Laboratory | RSelenium |
Biodiversity data integration--The significance of data resolution and domain | 2019 | König et al. | PLOS Biology | taxize |
Mapping and understanding the digital biodiversity knowledge about vertebrates in the Atlantic Rainforest | 2019 | Higino & Vital | Center for Open Science | taxize |
colocr: An R package for conducting co-localization analysis on fluorescence microscopy images | 2019 | Ahmed et al. | PeerJ | colocr |
SoEM: a novel PCR-free biodiversity assessment method based on small-organelles enriched metagenomics | 2019 | Jo et al. | ALGAE | taxize |
Does evolutionary history determine specificity in broad ecological interactions? | 2019 | Shefferson et al. | Journal of Ecology | rotl |
A machine learning framework for automated analysis of central bank communication and media discourse. The case of Narodowy Bank Polski | 2019 | Rybinski | Bank & Credit | RSelenium |
All by myself? Meta‐analysis of animal contests shows stronger support for self than for mutual assessment models | 2019 | Pinto et al. | Biological Reviews | rotl |
Modelling Function-Valued Processes with Nonseparable Covariance Structure | 2019 | Konzen et al. | arXiv | weathercan |
Detection of Vegetation Cover Change in Renewable Energy Development Zones of Southern California Using MODIS NDVI Time Series Analysis, 2000 to 2018 | 2019 | Nghiem et al. | Environments | MODIStsp |
KLRfome - Kernel Logistic Regression on Focal Mean Embeddings | 2019 | Harris | Journal of Open Source Software | NLMR |
Improving the detection of wildfire disturbances in space and time based on indicators extracted from MODIS data: a case study in northern Portugal | 2019 | Marcos et al. | International Journal of Applied Earth Observation and Geoinformation | MODIStsp |
Global buffering of temperatures under forest canopies | 2019 | De Frenne et al. | Nature Ecology & Evolution | CoordinateCleaner |
The Two-Way Street of Open Access Journal Publishing | 2019 | Matthias et al. | Flip It and Reverse It. Publications | rcrossref |
The role of the environment in the evolution of nest shape in Australian passerines | 2019 | Medina | Scientific Reports | rgbif |
An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies | 2019 | Axtner et al. | GigaScience | taxize |
Bats in a changing landscape: Linking occupancy and traits of a diverse montane bat community to fire regime | 2019 | Blakey et al. | Ecology and Evolution | rnoaa |
Climate change impact on ecosystem functions provided by birds in southeastern Amazonia | 2019 | Miranda et al. | PLOS ONE | rgbif |
Transitioning from recruit to officer: An investigation of how stress appraisal and coping influence work engagement | 2019 | Rodrigues et al. | International Journal of Selection and Assessment | skimr |
Dataset of Jaccard similarity indices from 1,597 European political manifestos across 27 countries (1945–2017 | 2019 | Sanger & Warin | Data in Brief | textreuse |
Paleoclimate, ecoregion size, and degree of isolation explain regional biodiversity differences among terrestrial vertebrates within the Congo Basin | 2019 | Perre et al. | Belgian Journal of Zoology | rgbif, rredlist |
Pedestrian Count Expansion Methods: Bridging the Gap between Land Use Groups and Empirical Clusters | 2019 | Medury et al. | Transportation Research Record: Journal of the Transportation Research Board | FedData |
Inference of biogeographic history by formally integrating distinct lines of evidence: genetic, environmental niche, and fossil | 2019 | Hoban et al. | Ecography | rgbif |
Space use and social association in a gregarious ungulate: Testing the conspecific attraction and resource dispersion hypotheses | 2019 | Peignier et al. | Ecology and Evolution | spatsoc |
Managerial Self-Attribution Bias and Banks’ Future Performance: Evidence from Emerging Economies | 2019 | Iqbal | Journal of Risk and Financial Management | pdftools |
Greater vulnerability to warming of marine versus terrestrial ectotherms | 2019 | Pinsky et al. | Nature | rfishbase, rnoaa |
Revisiting the classification of Melastomataceae: implications for habit and fruit evolution | 2019 | Bacci et al. | Botanical Journal of the Linnean Society | rgbif |
Automated Dictionary Creation for Analyzing Text: An Illustration from Stereotype Content | 2019 | Nicolas et al. | PsyArXiv | hunspell |
Exploring the Daschle Collection using Text Mining | 2019 | Bayer & Michael | arXiv | hunspell, tesseract |
Morphology, ecology, and biogeography of independent origins of cleaning behavior around the world | 2019 | Baliga & Mehta | Integrative and comparative biology | rgbif |
Turning the tables: A university league-table based on quality not quantity | 2019 | Barnett & Moher | F1000Research | rentrez |
Rate dynamics of ectotherm responses to thermal stress | 2019 | Kovacevic et al. | Proceedings of the Royal Society B: Biological Sciences | rotl |
Bony Patchwork: Mosaic Patterns of Evolution in the Skull of Electric Fishes | 2019 | Evans et al. | Integrative and Comparative Biology | phylotaR |
Outstanding plant endemism levels strongly support the recognition of campo rupestre provinces in mountaintops of eastern South America | 2019 | Colli‐Silva et al. | Journal of Biogeography | CoordinateCleaner |
An automated multi-model evapotranspiration mapping framework using remotely sensed and reanalysis data | 2019 | Bhattarai et al. | Remote Sensing of Environment | MODIStsp |
Swirling in the ocean: immature loggerhead turtles seasonally target old anticyclonic eddies at the fringe of the North Atlantic gyre | 2019 | Chambault et al. | Progress in Oceanography | clifro |
Dual colonization of European high-altitude areas from Asia by Callianthemum (Ranunculaceae | 2019 | Kadereit et al. | Plant Systematics and Evolution | rgbif |
Modelling the biochemical and sensory changes of strawberries during storage under diverse relative humidity conditions | 2019 | Ktenioudaki et al. | Postharvest Biology and Technology | writexl |
Predicting malaria cases using remotely sensed environmental variables in Nkomazi, South Africa | 2019 | Adeola et al. | Geospatial Health | MODIStsp |
Variability in growth and biomass allocation and the phenotypic plasticity of seven Prosopis pallida populations in response to water availability | 2019 | Salazar et al. | Trees | magick |
The Gene Sculpt Suite: a set of tools for genome editing | 2019 | Mann et al. | Nucleic Acids Research | rentrez |
tRNAviz: explore and visualize tRNA sequence features | 2019 | Lin et al. | Nucleic Acids Research | taxize |
Assessing sampling coverage of species distribution in biodiversity databases | 2019 | Sporbert et al. | Journal of Vegetation Science | taxize |
Robustness Spatiotemporal Clustering and Trend Detection of Rainfall Erosivity Density in Greece | 2019 | Vantas et al. | Water | hydroscoper |
The grass subfamily Pooideae: Cretaceous–Palaeocene origin and climate‐driven Cenozoic diversification | 2019 | Schubert et al. | Global Ecology and Biogeography | rgbif |
Climatic controls of decomposition drive the global biogeography of forest-tree symbioses | 2019 | Steidinger et al. | Nature | taxize |
High-throughput environmental DNA analysis informs a biological assessment of an urban stream | 2019 | Bagley et al. | Ecological Indicators | taxize |
Do latex and resin canals spur plant diversification? Re‐examining a classic example of escape and radiate coevolution | 2019 | Foisy et al. | Journal of Ecology | taxize |
Mechanistic niche modelling to identify favorable growth sites of temperate macroalgae | 2019 | Westmeijer et al. | Algal Research | rgbif |
What is the best method of family planning for me?: a text mining analysis of messages between users and agents of a digital health service in Kenya | 2019 | Green et al. | Gates Open Research | hunspell, cld2 |
Morphological and functional diversity of piscivorous fishes on coral reefs | 2019 | Mihalitsis & Bellwood | Coral Reefs | rotl |
The Quality of Work Life Scale: Validity Evidence from Brazil and Portugal | 2019 | Sinval et al. | Applied Research in Quality of Life | skimr |
The relationship between geographic range extent, sea surface temperature and adult traits in coastal temperate fishes | 2019 | Goodman et al. | Journal of Biogeography | rfishbase |
A new homogenized daily data set for temperature variability assessment in Italy | 2019 | Fioravanti et al. | International Journal of Climatology | RSelenium |
Using the HPTLC-bioluminescence bacteria assay for the determination of acute toxicities in marine sediments and its eligibility as a monitoring assessment tool | 2019 | Logemann et al. | Chemosphere | magick |
Design of a common pathway drug for all types of cardiovascular diseases: A network biology approach | 2019 | Al-Mustanjid | Network Biology | rentrez |
Soil and climactic predictors of canine coccidioidomycosis seroprevalence in Washington State: an ecological cross‐sectional study | 2019 | Meisner et al. | Transboundary and Emerging Diseases | FedData |
Effects of antipredator training, environmental enrichment, and soft release on wildlife translocations: A review and meta-analysis | 2019 | Tetzlaff et al. | Biological Conservation | rotl |
High correlation between species‐level environmental data estimates extracted from IUCN expert range maps and from GBIF occurrence data | 2019 | Alhajeri & Fourcade | Journal of Biogeography | rredlist, rgbif |
Single Fragment or Bulk Soil DNA Metabarcoding: Which is Better for Characterizing Biological Taxa Found in Surface Soils for Sample Separation? | 2019 | Boggs et al. | Genes | taxize |
Dataset of occurrence and incidence of pine processionary moth in Andalusia, south Spain | 2019 | Ros-Candeira et al. | ZooKeys | rgbif |
Little difference in average fish growth and maximum size across temperatures | 2019 | Van Denderen et al. | EcoEvoRxiv | rfishbase |
A metadata approach to evaluate the state of ocean knowledge: Strengths, limitations, and application to Mexico | 2019 | Palacios-Abrantes et al. | PLOS ONE | taxize |
Linking Biodiversity Data Using Evolutionary History | 2019 | McTavish | Biodiversity Information Science and Standards | rotl |
Assessing the vulnerability of Africa’s freshwater fishes to climate change: A continent-wide trait-based analysis | 2019 | Nyboer et al. | Biological Conservation | rfishbase, rredlist |
Deathbed choice by ASF‐infected wild boar can help find carcasses | 2019 | Morelle et al. | Transboundary and Emerging Diseases | osmdata |
Linking Biodiversity Data Using Evolutionary History | 2019 | McTavish | Bio/diversity Information Science and Standards | rgbif |
Biodiversidata: An Open-Access Biodiversity Database for Uruguay | 2019 | Grattarola et al. | Biodiversity Data Journal | rredlist, taxize |
The morphology and circuity of walkable, bikeable, and drivable street networks in Phnom Penh, Cambodia | 2019 | Yen et al. | Environment and Planning B: Urban Analytics and City Science | stplanr |
Cashew Tree Pollen: An Unknown Source of IgE-Reactive Molecules | 2019 | Danella Figo et al. | International Journal of Molecular Sciences | taxize |
Bottom-up drivers of global patterns of demersal, forage, and pelagic fishes | 2019 | Petrik et al. | Progress in Oceanography | rfishbase |
A Computational Analysis of Natural Languages to Build a Sentence Structure Aware Artificial Neural Network | 2019 | Calderone | arXiv | tokenizers |
Timing and ecological priority shaped the diversification of sedges in the Himalayas | 2019 | Uzma et al. | PeerJ | rgbif |
Important At-Sea Areas of Colonial Breeding Marine Predators on the Southern Patagonian Shelf | 2019 | Baylis et al. | Scientific Reports | rerddap |
Data Location Quality at GBIF | 2019 | Waller | Biodiversity Information Science and Standards | CoordinateCleaner |
Environmental DNA reveals landscape mosaic of wetland plant communities | 2019 | Shackleton et al. | Global Ecology and Conservation | rentrez |
Achieving explanatory depth and spatial breadth in infectious disease modelling: Integrating active and passive case surveillance | 2019 | Nelli et al. | Statistical Methods in Medical Research | MODIStsp |
Brain Amyloid PET Tracer Delivery is Related to White Matter Integrity in Patients with Mild Cognitive Impairment | 2019 | Brown et al. | Journal of Neuroimaging | tacmagic |
Computational Drug Screening Identifies Compounds Targeting Renal Age-associated Molecular Profiles | 2019 | Koppelstaetter et al. | Computational and Structural Biotechnology Journal | rentrez |
The Evolution of Color Pattern in Butterflyfishes (Chaetodontidae | 2019 | Alfaro et al. | Integrative and Comparative Biology | rfishbase |
Life history traits predict colonization and extinction lags of desert plant species since the Last Glacial Maximum | 2019 | Butterfield et al. | Ecology | rgbif, CoordinateCleaner |
Oviductal extracellular vesicles interact with the spermatozoon’s head and mid-piece and improves its motility and fertilizing ability in the domestic cat | 2019 | Ferraz et al. | Scientific Reports | rentrez |
Assessing the Species in the CARES Preservation Program and the Role of Aquarium Hobbyists in Freshwater Fish Conservation | 2019 | Valdez & Mandrekar | MDPI AG | rfishbase |
Using ignorance scores to explore biodiversity recording effort for multiple taxa in the Caatinga | 2019 | Correia et al. | Ecological Indicators | rgbif |
Projection Word Embedding Model With Hybrid Sampling Training for Classifying ICD-10-CM Codes: Longitudinal Observational Study | 2019 | Lin et al. | JMIR Medical Informatics | hunspell |
JPhyloIO: a Java library for event-based reading and writing of different phylogenetic file formats through a common interface | 2019 | Stöver et al. | BMC Bioinformatics | RNeXML |
Environmental Heterogeneity and Not Vicariant Biogeographic Barriers Generate Community Wide Population Structure in Desert Adapted Snakes | 2019 | Myers et al. | Molecular Ecology | spocc |
Explainable statistical learning in public health for policy development: the case of real-world suicide data | 2019 | Van Schaik et al. | BMC medical research methodology | fingertipsR |
Mountain building, climate cooling and the richness of cold‐adapted plants in the Northern Hemisphere | 2019 | Hagen et al. | Journal of Biogeography | taxize |
Macroecology in the age of Big Data – Where to go from here? | 2019 | Wüest et al. | Journal of Biogeography | CoordinateCleaner |
A Regionalisation Approach for Rainfall based on Extremal Dependence | 2019 | Saunders et al. | arXiv | rnoaa |
Non‐specific amplification compromises environmental DNA metabarcoding with COI | 2019 | Collins et al. | Methods in Ecology and Evolution | rentrez, rgbif, bold, rfishbase |
Immunosenescence in wild animals: meta‐analysis and outlook | 2019 | Peters et al. | Ecology Letters | rotl |
geneHummus: an R package to define gene families and their expression in legumes and beyond | 2019 | Die et al. | BMC Genomics | rentrez |
Random Forest Ability in Regionalizing Hourly Hydrological Model Parameters | 2019 | Saadi et al. | Water | FedData |
Internal Seed Structure of Alpine Plants and Extreme Cold Exposure | 2019 | Jaganathan & Dalrymple | Data | rgbif |
Habitat productivity is a poor predictor of body size in rodents | 2019 | Alhajeri et al. | Current Zoology | taxize |
Build science in Africa | 2019 | Atickem et al. | Nature | rnaturalearth |
dataMaid: Your Assistant for Documenting Supervised Data Quality Screening in R | 2019 | Petersen & Ekstrøm | Journal of Statistical Software | assertr |
False-negative malaria rapid diagnostic test results and their impact on community-based malaria surveys in sub-Saharan Africa | 2019 | Watson et al. | BMJ Global Health | rdhs |
Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance | 2019 | Piper et al. | GigaScience | fulltext, rentrez, bold |
Nudging consumers for relevant data using Free JAR profiling: an application to product development | 2019 | Luc et al. | Food Quality and Preference | hunspell, spelling |
Sentiment analysis as a measure of conservation culture in scientific literature | 2019 | Lennox et al. | Conservation Biology | rredlist, taxize |
Polyploidy promotes species diversification of Allium through ecological shifts | 2019 | Han et al. | New Phytologist | chromer |
Quantifying trends and uncertainty in prehistoric forest composition in the upper Midwestern United States | 2019 | Dawson et al. | Ecology | rredlist |
Classifying fishing behavioral diversity using high-frequency movement data | 2019 | O’Farrell et al. | Proceedings of the National Academy of Sciences | rerddap |
Biological and environmental drivers of trophic ecology in marine fishes - a global perspective | 2019 | Hayden et al. | Scientific Reports | rgbif, rfishbase |
The influence of phylogeny and ecology on root, shoot and plant ionomes of fourteen native Brazilian species | 2019 | Neugebauer et al. | Physiologia Plantarum | rentrez |
How sensitive are climatic niche inferences to distribution data sampling? A comparison of Biota of North America Program (BONAP) and Global Biodiversity Information Facility (GBIF) datasets | 2019 | Pender et al. | Ecological Informatics | spocc, rgbif, CoordinateCleaner |
Food web structure selects for parasite host range | 2019 | Park | Proceedings of the Royal Society B: Biological Sciences | rotl |
Reported patterns of pregnancy termination from Demographic and Health Surveys | 2019 | Sánchez-Páez & Ortega | PLOS ONE | rdhs |
Data-based investigation on the performance of an independent Gas turbine for electricity generation using real power measurements and other closely related parameters | 2019 | Ayodele Benjamin et al. | Data in Brief | writexl |
Assessing the vulnerability of Australia’s urban forests to climate extremes | 2019 | Esperon‐Rodriguez et al. | PLANTS, PEOPLE, PLANET | taxize, rgbif |
Main drivers of freshwater fish diversity across extra-tropical Southern Hemisphere rivers | 2019 | Lacy et al. | Hydrobiologia | rfishbase |
Cyberinfrastructure and resources to enable an integrative approach to studying forest trees | 2019 | Wegrzyn et al. | Evolutionary Applications | biomartr |
The cost of standing tall: wood nutrients associated with tree invasions in nutrient‐poor fynbos soils of South Africa | 2019 | Redmond et al. | Ecosphere | brranching |
Topic Analysis of UK Fitness to Practise Cases: What Lessons Can Be Learnt? | 2019 | Hanna & Hanna | Pharmacy | pdftools |
Automated extraction of treatment patterns from social media posts: an exploratory analysis in renal cell carcinoma | 2019 | Ramagopalan et al. | Future Oncology | hunspell |
Evaluating the efficacy of small‐scale marine protected areas for preserving reef health: A case study applying emerging monitoring technology | 2019 | Bayley et al. | Aquatic Conservation: Marine and Freshwater Ecosystems | rfishbase |
Functional implications of dentition-based morphotypes in piscivorous fishes | 2019 | Mihalitsis & Bellwood | Royal Society Open Science | rotl |
Depth habitat of the planktonic foraminifera Neogloboquadrina pachyderma in the northern high latitudes explained by sea-ice and chlorophyll concentrations | 2019 | Greco et al. | Biogeosciences | pangaear |
Concurrent participation in screening for cervical, breast, and bowel cancer in England | in press | Rebolj et al. | Journal of Medical Screening | fingertipsR |
A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean | 2019 | Friedman et al. | Proceedings of the Royal Society B: Biological Sciences | rfishbase |
Illustrating the importance of meta-analysing variances alongside means in ecology and evolution | 2019 | Sánchez-Tójar et al. | Center for Open Science | rotl |
Agriculture erases climate constraints on soil nematode communities across large spatial scales | 2019 | Li et al. | Global Change Biology | rotl |
Assessing Impact of Outreach through Software Citation for Community Software in Geodynamics | 2019 | Hwang et al. | Computing in Science & Engineering | pdftools |
virtualNicheR: generating virtual fundamental and realised niches for use in virtual ecology experiments | 2019 | Etherington & Omondiagbe | Journal of Open Source Software | NLMR, landscapetools |
Homogenization of freshwater lakes: recent compositional shifts in fish communities are explained by gamefish movement and not climate change | 2019 | Cazelles et al. | Global Change Biology | taxize, rfishbase |
Spatio-temporal monitoring and modelling of birch pollen levels in Belgium | 2019 | Verstraeten et al. | Aerobiologia | MODIStsp |
Novel interactions between alien pathogens and native plants increase plant‐pathogen network connectance and decrease specialization | 2019 | Bufford et al. | Journal of Ecology | taxize |
The interconnectedness of the economic content in the speeches of the US Presidents | 2019 | Cinelli et al. | Annals of Operations Research | hunspell |
bamlss: A Lego Toolbox for Flexible Bayesian Regression | 2019 | Umlauf et al. | arXiv | rnaturalearth |
Thirty-six years of legal and illegal wildlife trade entering the USA | 2019 | Bager Olsen et al. | Oryx | rredlist |
Geography is more important than host plant use for the population genetic structure of a generalist insect herbivore | 2019 | Vidal et al. | Molecular Ecology | brranching |
Global distribution and diversity of Chaetoceros (Bacillariophyta, Mediophyceae): integration of classical and novel strategies | 2019 | De Luca et al. | PeerJ | rgbif |
Bayesian ages for pollen records since the last glaciation in North America | 2019 | Wang et al. | Scientific Data | neotoma |
Can we decode phonetic features in inner speech using surface electromyography? | 2019 | Nalborczyk et al. | Center for Open Science | skimr |
The metaRbolomics Toolbox in Bioconductor and beyond | 2019 | Stanstrup et al. | Metabolites | webchem |
A checklist for maximizing reproducibility of ecological niche models | 2019 | Feng et al. | Nature Ecology & Evolution | CoordinateCleaner |
Mutualism as a plant functional trait: linking variation in the mycorrhizal symbiosis to climatic tolerance, geographic range and population dynamics | 2019 | Maherali | International Journal of Plant Sciences | rotl |
Spatial quantification to examine the effectiveness of payments for ecosystem services: A case study of Costa Rica’s Pago de Servicios Ambientales | 2020 | Havinga et al. | Ecological Indicators | rgbif |
Global wildlife trade across the tree of life | 2019 | Scheffers et al. | Science | rredlist |
Homogenization of a combined hourly air temperature dataset over Romania | 2019 | Dumitrescu et al. | International Journal of Climatology | rnoaa |
MODIS 대기자료를 활용한 남북한 기상관측소에서의 냉방도일 추정 | 2019 | Yoo et al. | 한국농림기상학회지 | MODIStsp |
Cultural Evolution of Sustainable Behaviours: Pro-Environmental Tipping Points in an Agent-Based Model | 2019 | Kaaronen & Strelkovskii | Center for Open Science | nlrx |
When context matters: Spatial prediction models of environmental conditions can identify target areas for wild bee habitat management interventions | 2020 | Sydenham et al. | Landscape and Urban Planning | taxize |
Phytosociological data and herbarium collections show congruent large scale patterns but differ in their local descriptions of community composition | 2019 | Bottin et al. | Journal of Vegetation Science | taxize |
GENAVi: a shiny web application for gene expression normalization, analysis and visualization | 2019 | Reyes et al. | BMC Genomics | iheatmapr |
Characterization of Salmonella Dublin isolated from bovine and human hosts | 2019 | Paudyal et al. | BMC Microbiology | treeio |
Extensive mismatches between species distributions and performance and their relationship to functional traits | 2019 | Bohner & Diez | Ecology Letters | brranching |
Patterns and variation in the mammal parasite–glucorticoid relationship | 2019 | Defolie et al. | Biological Reviews | rotl |
Creating and sharing reproducible research code the workflowr way | 2019 | Blischak et al. | F1000Research | git2r |
Text‐analysis reveals taxonomic and geographic disparities in animal pollination literature | 2019 | Millard et al. | Ecography | taxize |
A pilot study of the performance of captive‐reared delta smelt Hypomesus transpacificus in a semi‐natural environment | 2019 | Hung et al. | Journal of Fish Biology | taxize |
Environmental and biotic drivers of soil microbial β‐diversity across spatial and phylogenetic scales | 2019 | Chalmandrier et al. | Ecography | taxize |
Characterization of two‐dimensional materials from Raman spectral data | 2019 | Mishra & Narayan Tripathi | Journal of Raman Spectroscopy | rplos, rcrossref, fulltext |
Semantic Network Analysis (SemNA): A Tutorial on Preprocessing, Estimating, and Analyzing Semantic Networks | 2019 | Christensen & Kenett | Center for Open Science | hunspell |
Assessment of Winter Barley in Minnesota: Relationships among Cultivar, Fall Seeding Date, Winter Survival, and Grain Yield | 2019 | Zhong et al. | Cftm | rnoaa |
Creating a Reliable Mass Spectral–Retention Time Library for All Ion Fragmentation-Based Metabolomics | 2019 | Tada et al. | Metabolites | webchem |
A near-full-length HIV-1 | 2019 | Gryseels et al. | Cold Spring Harbor Laboratory | taxize |
A Genome-Based Species Taxonomy of the Lactobacillus Genus Complex | 2019 | Wittouck et al. | mSystems | rentrez |
Technology opportunity discovery by structuring user needs based on natural language processing and machine learning | 2019 | Roh et al. | PLOS ONE | RSelenium |
Where are all the moms? External fertilization predicts the rise of male parental care in bony fishes | 2019 | Benun Sutton & Wilson | Evolution | rfishbase |
Making reference solar forecasts with climatology, persistence, and their optimal convex combination | 2019 | Yang | Solar Energy | camsRad |
Moss occurrences in Yugyd Va National Park, Subpolar and Northern Urals, European North-East Russia | 2019 | Zheleznova et al. | Biodiversity Data Journal | taxize |
A method for computing hourly, historical, terrain‐corrected microclimate anywhere on earth | 2019 | Kearney et al. | Methods in Ecology and Evolution | rnoaa |
Transcriptome Ortholog Alignment Sequence Tools (TOAST) for Phylogenomic Dataset Assembly | 2019 | Dornburg et al. | Research Square | rentrez |
Complex responses of phototrophic communities to climate warming during the Holocene of northeastern Ontario, Canada | 2019 | Elmslie et al. | The Holocene | neotoma |
Tradeoffs in the value of biodiversity feature and cost data in conservation prioritization | 2019 | Rodewald et al. | Scientific Reports | rnaturalearth |
Annual estimates of occupancy for bryophytes, lichens and invertebrates in the UK, 1970–2015 | 2019 | Outhwaite et al. | Scientific Data | taxize |
Community-level respiration of prokaryotic microbes may rise with global warming | 2019 | Smith et al. | Nature Communications | taxize |
Assessing climate change and adaptive capacity at local scale using observed and remotely sensed data | 2019 | Mpandeli et al. | Weather and Climate Extremes | MODIStsp |
Using an ensemble modelling approach to predict the potential distribution of Himalayan gray goral (Naemorhedus goral bedfordi) in Pakistan | 2020 | Ahmad et al. | Global Ecology and Conservation | rgbif |
Phenology responses of temperate butterflies to latitude depend on ecological traits | 2019 | Faltýnek Fric et al. | Ecology Letters | rgbif |
Did the Black Panther Movie Make Blacks Blacker? Examining Black Racial Identity on Twitter Before and After the Black Panther Movie Release | 2019 | Firmansyah & Jones | Social Informatics | rtweet |
Species Richness and Taxonomic Distinctness of Zooplankton in Ponds and Small Lakes from Albania and North Macedonia: The Role of Bioclimatic Factors | 2019 | Mancinelli et al. | Water | taxize |
Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats | 2019 | Sigsgaard et al. | Conservation Biology | taxize |
Asymmetric patterns of global diversity among plants and mycorrhizal fungi | 2019 | Toussaint et al. | Journal of Vegetation Science | taxize |
The Scaling of Genome Size and Cell Size Limits Maximum Rates of Photosynthesis with Implications for Ecological Strategies | 2019 | Roddy et al. | International Journal of Plant Sciences | brranching |
Spatial distribution of agricultural pesticide use and predicted wetland exposure in the Canadian Prairie Pothole Region | 2019 | Malaj et al. | Science of The Total Environment | webchem |
Environmental hazards, rigid institutions, and transformative change: How drought affects the consideration of water and climate impacts in infrastructure management | 2019 | Ulibarri & Scott | Global Environmental Change | pdftools, tokenizers |
Neogene paleoecology and biogeography of a Malvoid pollen in northwestern South America | 2020 | Espinosa et al. | Review of Palaeobotany and Palynology | CoordinateCleaner |
Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation | 2019 | Upham et al. | PLOS Biology | magick |
BDcleaner: A workflow for cleaning taxonomic and geographic errors in occurrence data archived in biodiversity databases | 2020 | Jin & Yang | Global Ecology and Conservation | taxize, taxizedb, CoordinateCleaner, scrubr |
A third of the tropical African flora is potentially threatened with extinction | 2019 | Stévart et al. | Science Advances | rredlist, rgbif |
Lessepsian fish invasion in Mediterranean marine protected areas: a risk assessment under climate change scenarios | 2019 | D’Amen & Azzurro | ICES Journal of Marine Science | rgbif |
Biogeography and conservation status of the pineapple family (Bromeliaceae | 2019 | Zizka et al. | Diversity and Distributions | CoordinateCleaner |
Spatiotemporal dynamics of urbanization and cropland in the Nile Delta of Egypt using machine learning and satellite big data: implications for sustainable development | 2019 | Badreldin et al. | Environmental Monitoring and Assessment | MODIStsp |
Using Social Media to Uncover Treatment Experiences and Decisions in Patients With Acute Myeloid Leukemia or Myelodysplastic Syndrome Who Are Ineligible for Intensive Chemotherapy: Patient-Centric Qualitative Data Analysis | 2019 | Booth et al. | Journal of Medical Internet Research | hunspell |
From hunter-gatherers to nomadic pastoralists: forager bands do not tell the whole story of the evolution of human cooperation | 2019 | Næss | Center for Open Science | rnaturalearth |
Antigen presentation and tumor immunogenicity in cancer immunotherapy response prediction | 2019 | Wang et al. | eLife | UCSCXenaTools |
Predicting recruitment density dependence and intrinsic growth rate for all fishes worldwide using a data‐integrated life‐history model | 2019 | Thorson | Fish and Fisheries | rfishbase |
Predator responses to fire: A global systematic review and meta‐analysis | 2020 | Geary et al. | Journal of Animal Ecology | taxize |
Ensemble modeling of the potential distribution of the whale shark in the Atlantic Ocean | 2019 | Báez et al. | Ecology and Evolution | spocc |
Species occurrence of ticks in South America, and interactions with biotic and abiotic traits | 2019 | Estrada-Peña et al. | Scientific Data | MODIStsp, rotl |
TOFF, a database of traits of fish to promote advances in fish aquaculture | 2019 | Lecocq et al. | Scientific Data | rfishbase |
Can we justify producing univariate machine-learning forecasts with satellite-derived solar irradiance? | 2019 | Yagli et al. | Applied Energy | camsRad |
The SMART App: an interactive web application for comprehensive DNA methylation analysis and visualization | 2019 | Li et al. | Epigenetics & Chromatin | UCSCXenaTools |
Releasing a preprint is associated with more attention and citations for the peer-reviewed article | 2019 | Fu & Hughey | eLife | rcrossref, rentrez, rAltmetric |
Ray fractions and carbohydrate dynamics of tree species along a 2750 m elevation gradient indicate climate response, not spatial storage limitation | 2020 | Godfrey et al. | New Phytologist | rotl |
Extinction filters mediate the global effects of habitat fragmentation on animals | 2019 | Betts et al. | Science | NLMR, landscapetools |
Higher frequency of vertebrate‐infecting viruses in the gut of infants born to mothers with type 1 diabetes | 2020 | Kim et al. | Pediatric Diabetes | iheatmapr |
Forecasting mussel settlement using historical data and boosted regression trees | 2019 | Atalah & Forrest | Aquaculture Environment Interactions | clifro |
TEffectR: an R package for studying the potential effects of transposable elements on gene expression with linear regression model | 2019 | Karakülah et al. | PeerJ | biomartr |
Distribution Modelling of Porites (Poritidae) in Indonesia | 2019 | Yusri et al. | IOP Conference Series: Earth and Environmental Science | rgbif |
Nonlinear population dynamics are ubiquitous in animals | 2019 | Clark & Luis | Nature Ecology & Evolution | rotl |
High land-use intensity in grasslands constrains wild bee species richness in Europe | 2020 | Ekroos et al. | Biological Conservation | rgbif |
A data and text mining pipeline to annotate human mitochondrial variants with functional and clinical information | 2019 | Vitale et al. | Molecular Genetics & Genomic Medicine | rentrez, fulltext |
The Sentiment Analysis of Tweets as a New Tool to Measure Public Perception of Male Erectile and Ejaculatory Dysfunctions | 2019 | Sansone et al. | Sexual Medicine | rtweet |
Using a Chord Diagram to Visualize Dynamics in Contraceptive Use: Bringing Data Into Practice | 2019 | Finnegan et al. | Global Health: Science and Practice | rdhs |
Neuroanatomical profiles of treatment-resistance in patients with schizophrenia spectrum disorders | 2020 | Kim et al. | Progress in Neuro-Psychopharmacology and Biological Psychiatry | chlorpromazineR |
Data Validation Infrastructure for R | 2019 | Loo & Jonge | arXiv | assertr |
Exploring snake occurrence records: Spatial biases and marginal gains from accessible social media | 2019 | Marshall & Strine | PeerJ | rgbif, taxize, CoordinateCleaner, rnaturalearth |
Invisible brokers: “citizen science” on Twitter | 2019 | Tancoigne | Journal of Science Communication | rtweet |
Quantifying the Bicycle Share Gender Gap | 2019 | Hosford & Winters | Transport Findings | bikedata |
Defining and evaluating microbial contributions to metabolite variation in microbiome-metabolome association studies | 2019 | Noecker et al. | mSystems | biomartr |
Datataxa: a new script to extract metadata sequence information from GenBank, the Flora of Bajío as a case study | 2019 | Ruiz-Sanchez et al. | Botanical Sciences | restez, phylotaR |
Approaches to Mormon Identity and Practice in the #ldsconf Twitter Hashtag | 2019 | Greenhalgh et al. | Journal of Media and Religion | rtweet |
GeneHummus: A pipeline to define gene families and their expression in legumes and beyond | 2018 | Die et al. | Cold Spring Harbor Laboratory | rentrez |
Visualisation of Brain Statistics with R-packages ggseg and ggseg3d | 2019 | Mowinckel & Vidal-Piñeiro | arXiv | magick |
Phytochemicals Involved in Plant Resistance to Leporids and Cervids: a Systematic Review | 2019 | Champagne et al. | Journal of Chemical Ecology | taxize |
Global‐scale species distributions predict temperature‐related changes in species composition of rocky shore communities in Britain | 2020 | Burrows et al. | Global Change Biology | taxize |
Flower traits, habitat, and phylogeny as predictors of pollinator service: a plant community perspective | 2020 | Herrera | Ecological Monographs | brranching |
Epibionts associated with floating Sargassum horneri in the Korea Strait | 2019 | Kim et al. | ALGAE | taxize |
Assessment of pre-treatment and classification methods for Java paddy field cropping pattern detection on MODIS images | 2020 | Fatikhunnada et al. | Remote Sensing Applications: Society and Environment | MODIStsp |
Species‐level image classification with convolutional neural network enables insect identification from habitus images | 2019 | Hansen et al. | Ecology and Evolution | taxize |
Differential patterns of floristic phylogenetic diversity across a post‐glacial landscape | 2019 | Mienna et al. | Journal of Biogeography | rgbif |
Palynological analysis of dental calculus from Pleistocene proboscideans of southern Brazil: A new approach for paleodiet and paleoenvironmental reconstructions | 2020 | Asevedo et al. | Palaeogeography, Palaeoclimatology, Palaeoecology | CoordinateCleaner |
Identifying predictors of personal exposure to air temperature in peri-urban India | 2020 | Milà et al. | Science of The Total Environment | riem, rtimicropem |
Mapping suitability for rice production in inland valley landscapes in Benin and Togo using environmental niche modeling | 2020 | Akpoti et al. | Science of The Total Environment | MODIStsp |
If I give you my emotion, what do I get? Conceptualizing and measuring the co-created emotional value of the brand | 2020 | Mingione et al. | Journal of Business Research | rtweet |
Integrating univariate niche dynamics in species distribution models: A step forward for marine research on biological invasions | 2019 | D’Amen & Azzurro | Journal of Biogeography | rgbif |
The interactome and proteomic responses of ALKBH7 in cell lines by in-depth proteomics analysis | 2019 | Meng et al. | Proteome Science | iheatmapr |
Climate: An R Package to Access Free In-Situ Meteorological and Hydrological Datasets For Environmental Assessment | 2020 | Czernecki et al. | Sustainability | rnaturalearth |
Spaceflight and simulated microgravity suppresses macrophage development via altered RAS/ERK/NFκB and metabolic pathways | 2020 | Shi et al. | Cellular & Molecular Immunology | iheatmapr |
Fruit resource provisioning for avian frugivores: The overlooked side of effectiveness in seed dispersal mutualisms | 2020 | Quintero et al. | Journal of Ecology | taxize |
Mediterranean marine protected areas have higher biodiversity via increased evenness, not abundance | 2020 | Blowes et al. | Journal of Applied Ecology | rfishbase |
Innovative Approaches in Sports Science—Lexicon-Based Sentiment Analysis as a Tool to Analyze Sports-Related Twitter Communication | 2020 | Wunderlich & Memmert | Applied Sciences | rtweet |
A deep dive into the ancestral chromosome number of flowering plants | 2020 | Carta et al. | Cold Spring Harbor Laboratory | chromer |
Unveiling geographical gradients of species richness from scant occurrence data | 2020 | Alves et al. | Global Ecology and Biogeography | rgbif |
Curriculum and labor market: Comparative analysis of the curricular outcomes of the study program in sociology at the Faculty of Philosophy, University of Belgrade and the required competences in the labor market | 2019 | Jaric & Djeric | Sociologija | cld2, textreuse |
Related plants tend to share pollinators and herbivores, but strength of phylogenetic signal varies among plant families | 2020 | Cirtwill et al. | New Phytologist | taxize |
RAD sequencing resolves the phylogeny, taxonomy and biogeography of Trichophoreae despite a recent rapid radiation (Cyperaceae | 2020 | Léveillé-Bourret et al. | Molecular Phylogenetics and Evolution | rgbif, CoordinateCleaner |
Quality and usability challenges of global marine biodiversity databases: An example for marine mammal data | 2020 | Moudrý & Devillers | Ecological Informatics | CoordinateCleaner |
Sentiment analysis of real-world migraine tweets for population research | 2020 | Deng et al. | Cephalalgia Reports | hunspell |
Considerations in adapting CRISPR/Cas9 in nongenetic model plant systems | 2020 | Shan et al. | Applications in Plant Sciences | rotl |
Selection for increased male size predicts variation in sexual size dimorphism among fish species | 2020 | Horne et al. | Proceedings of the Royal Society B: Biological Sciences | rotl |
Pathogenicity of human mtDNA variants is revealed by combining a novel phylogenetic analysis with machine learning | 2020 | Akpınar et al. | Cold Spring Harbor Laboratory | taxize |
Moving infections: individual movement decisions drive disease persistence in spatially structured landscapes | 2020 | Scherer et al. | Oikos | NLMR, landscapetools |
Migratory lineages rapidly evolve larger body sizes than non-migratory relatives in ray-finned fishes | 2020 | Burns & Bloom | Proceedings of the Royal Society B: Biological Sciences | rfishbase |
Should I shrink or should I flow? – body size adjustment to thermo-oxygenic niche | 2020 | Walczyńska et al. | Cold Spring Harbor Laboratory | rotl |
Maximum CO2 diffusion inside leaves is limited by the scaling of cell size and genome size | 2020 | Théroux-Rancourt et al. | Cold Spring Harbor Laboratory | brranching |
Orchid conservation and research: An analysis of gaps and priorities for globally Red Listed species | 2020 | Wraith et al. | Ambio | rgbif |
Diatoms Are Selective Segregators in Global Ocean Planktonic Communities | 2020 | Vincent & Bowler | mSystems | rglobi |
Molecular epidemiology of clinically high‐risk Pseudomonas aeruginosa strains: Practical overview | 2020 | Sawa et al. | Microbiology and Immunology | phylogram |
Trade‐offs with telemetry‐derived contact networks for infectious disease studies in wildlife | 2020 | Gilbertson et al. | Methods in Ecology and Evolution | spatsoc |
Rapid Least Concern: towards automating Red List assessments | 2020 | Bachman et al. | Biodiversity Data Journal | taxize, wicket, rgbif |
The Rhinella arenarum transcriptome: de novo assembly, annotation and gene prediction | 2020 | Ceschin et al. | Scientific Reports | rgbif |
Web-based Visualization of Daily Mobility Patterns in R | 2019 | Schmidt et al. | International Journal on Advances in Internet Technology | geojsonio |
Effects of Antibiotic Pretreatment of an Ulcerative Colitis-Derived Fecal Microbial Community on the Integration of Therapeutic Bacteria In Vitro | 2020 | Oliphant et al. | mSystems | rentrez |
Measuring the inequality of accessible trams in Melbourne | 2020 | Lope & Dolgun | Journal of Transport Geography | pdftools |
Pre-Columbian zoonotic enteric parasites: An insight into Puerto Rican indigenous culture diets and life styles | 2020 | Wiscovitch-Russo et al. | PLOS ONE | HelminthR, rglobi |
The Rockerverse: Packages and Applications for Containerization with R | 2020 | Nüst et al. | arXiv | RSelenium |
RGISTools: Downloading, Customizing | 2020 | Pérez-Goya et al. | arXiv | MODIStsp, MODISTools |
Does Sure Start spending improve school readiness? An ecological longitudinal study | 2020 | Senior | Center for Open Science | fingertipsR |
A system wide approach to managing zoo collections for visitor attendance and in situ conservation | 2020 | Mooney et al. | Nature Communications | taxize |
Towards a global understanding of the drivers of marine and terrestrial biodiversity | 2020 | Gagné et al. | PLOS ONE | taxize |
Living in polluted waters: A meta-analysis of the effects of nitrate and interactions with other environmental stressors on freshwater taxa | 2020 | Gomez Isaza et al. | Environmental Pollution | rotl |
Quantitative interactions drive Botrytis cinerea disease outcome across the plant kingdom | 2020 | Caseys et al. | Cold Spring Harbor Laboratory | iheatmapr |
Mapping patterns of abiotic and biotic stress resilience uncovers conservation gaps and breeding potential of Vigna wild relatives | 2020 | Van Zonneveld et al. | Scientific Reports | rgbif |
netGO: R-Shiny package for network-integrated pathway enrichment analysis | 2020 | Kim et al. | Bioinformatics | biomartr |
Expansion of known ssRNA phage genomes: From tens to over a thousand | 2020 | Callanan et al. | Science Advances | treeio |
Iron metabolic pathways in the processes of sponge plasticity | 2020 | Finoshin et al. | PLOS ONE | rotl |
The impact of the Pull of the Recent on extant elasmobranchs | 2020 | Pimiento & Benton | Palaeontology | paleobioDB, rfishbase |
Distribution of Bactrocera oleae (Rossi, 1790) throughout the Iberian Peninsula based on a maximum entropy modeling approach | 2020 | Benhadi‐Marín et al. | Annals of Applied Biology | rgbif |
Metaphylogenetic analysis of global sewage reveals that bacterial strains associated with human disease show less degree of geographic clustering | 2020 | Ahrenfeldt et al. | Scientific Reports | treeio |
Generalized rich-club ordering in networks | 2019 | Cinelli | Journal of Complex Networks | hunspell |
Potential reduction of Hartweg ́s Pine (Pinus hartwegii Lindl.) geographic distribution | 2020 | Alfaro-Ramírez et al. | PLOS ONE | CoordinateCleaner |
Unstable crop yields reveal opportunities for site-specific adaptations to climate variability | 2020 | Martinez-Feria & Basso | Scientific Reports | FedData |
Diversity of Bacterial Biosynthetic Genes in Maritime Antarctica | 2020 | Rego et al. | Microorganisms | rnaturalearth |
Life under an oil slick: response of a freshwater food web to simulated spills of diluted bitumen in field mesocosms | 2020 | Cederwall et al. | Canadian Journal of Fisheries and Aquatic Sciences | taxize |
A reference transcriptome for the early-branching fern Botrychium lunaria enables fine-grained resolution of population structure | 2020 | Mossion et al. | Cold Spring Harbor Laboratory | taxize |
A Framework for Applying Natural Language Processing in Digital Health Interventions | 2020 | Funk et al. | Journal of Medical Internet Research | hunspell |
RNA Sequencing (RNA-Seq) Reveals Extremely Low Levels of Reticulocyte-Derived Globin Gene Transcripts in Peripheral Blood From Horses (Equus caballus) and Cattle (Bos taurus | 2018 | Correia et al. | Frontiers in Genetics | skimr |
Patterns in research and data sharing for the study of form and function in caviomorph rodents | 2020 | Verde Arregoitia et al. | Journal of Mammalogy | taxize, pdftools |
Impact assessment of seven alien invasive bird species already introduced to South Africa | 2020 | Shivambu et al. | Biological Invasions | rgbif |
On the Matrix Condition of Phylogenetic Tree | 2020 | Jhwueng & O’Meara | Evolutionary Bioinformatics | rotl |
Ecological distinctiveness of birds and mammals at the global scale | 2020 | Cooke et al. | Global Ecology and Conservation | rredlist |
An Ontological Analysis and Natural Language Processing of Figures of Speech | 2020 | Panayiotou | International Journal of Artificial Intelligence & Applications | rdflib |
Large-scale Quantification of Vertebrate Biodiversity in Ailaoshan Nature Reserve from Leech iDNA | 2020 | Ji et al. | Cold Spring Harbor Laboratory | rredlist |
Substantially adaptive potential in polyploid cyprinid fishes: evidence from biogeographic, phylogenetic and genomic studies | 2020 | Li & Guo | Proceedings of the Royal Society B: Biological Sciences | rgbif |
Revisiting reptile home ranges: moving beyond traditional estimators with dynamic Brownian Bridge Movement Models | 2020 | Silva et al. | Cold Spring Harbor Laboratory | NLMR, landscapetools |
moveVis: Animating movement trajectories in synchronicity with static or temporally dynamic environmental data in R | 2020 | Schwalb‐Willmann et al. | Methods in Ecology and Evolution | magick |
Cheating in arbuscular mycorrhizal mutualism: a network and phylogenetic analysis of mycoheterotrophy | 2020 | Perez‐Lamarque et al. | New Phytologist | rotl |
Ecological strategies begin at germination: Traits, plasticity and survival in the first 4 days of plant life | 2020 | Larson et al. | Functional Ecology | brranching |
Do bipartite binary antagonistic and mutualistic networks have different responses to the taxonomic resolution of nodes? Ecological Entomology | 2020 | Rodrigues & Boscolo | Ecological Entomology | taxize |
Global determinants of freshwater and marine fish genetic diversity | 2020 | Manel et al. | Nature Communications | rfishbase |
Experimental hybridization studies suggest that pleiotropic alleles commonly underlie adaptive divergence between natural populations | 2020 | Thompson | The American Naturalist | taxize, rentrez |
30% land conservation and climate action reduces tropical extinction risk by more than 50%. Ecography | 2020 | Hannah et al. | Ecography | rgbif |
Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses | 2020 | Ryt-Hansen et al. | Viruses | treeio |
Barriers to coexistence limit the poleward range of a globally-distributed plant | 2020 | Armitage & Jones | Cold Spring Harbor Laboratory | CoordinateCleaner |
Do major host shifts spark diversification in butterflies? | 2020 | Kaczvinsky & Hardy | Ecology and Evolution | taxize |
Transitions between biomes are common and directional in Bombacoideae (Malvaceae | 2020 | Zizka et al. | Journal of Biogeography | taxize, rgbif, CoordinateCleaner |
Comparative drought resistance of temperate grassland species: testing performance trade-offs and the relation to distribution | 2020 | Jung et al. | Oecologia | rgbif |
Tunicate bulb size variation in monocots explained by temperature and phenology | 2020 | Howard & Cellinese | Ecology and Evolution | rgbif |
High correlation of species diversity patterns between specialist herbivorous insects and their specific hosts | 2020 | Du et al. | Journal of Biogeography | rgbif |
Applied R in the Classroom | 2020 | Long & Turner | Australian Economic Review | skimr |
Current and future global potential distribution of the fruit fly Drosophila suzukii (Diptera: Drosophilidae | 2020 | Reyes & Lira-Noriega | The Canadian Entomologist | spocc |
Shark movements in the Revillagigedo Archipelago and connectivity with the Eastern Tropical Pacific | 2020 | Lara-Lizardi et al. | Cold Spring Harbor Laboratory | osmdata |
Unsupervised modeling anomaly detection in discussion forums posts using global vectors for text representation | 2020 | Cichosz | Natural Language Engineering | hunspell |
Global distribution of coral diversity: Biodiversity knowledge gradients related to spatial resolution | 2020 | Kusumoto et al. | Ecological Research | rgbif |
Developmental cost theory predicts thermal environment and vulnerability to global warming | 2020 | Marshall et al. | Nature Ecology & Evolution | rotl |
Integration of single nucleotide variants and whole-genome DNA methylation profiles for classification of rheumatoid arthritis cases from controls | 2020 | Amiri Roudbar et al. | Heredity | rsnps |
Stress priming affects fungal competition – evidence from a combined experimental and modeling study | 2020 | Wesener et al. | Cold Spring Harbor Laboratory | nlrx |
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Global gut content data synthesis and phylogeny delineate reef fish trophic guilds | 2020 | Parravicini et al. | Cold Spring Harbor Laboratory | rfishbase |
Estimating Current and Future Rainfall Erosivity in Greece Using Regional Climate Models and Spatial Quantile Regression Forests | 2020 | Vantas et al. | Water | hydroscoper |
Three quarters of new criminological knowledge is hidden from policy makers | 2020 | Ashby | Center for Open Science | roadoi, rromeo |
Using ggtree to Visualize Data on Tree‐Like Structures | 2020 | Yu | Current Protocols in Bioinformatics | treeio |
nosoi: a stochastic agent-based transmission chain simulation framework in R | 2020 | Lequime et al. | Cold Spring Harbor Laboratory | treeio |
Pollinator niche partitioning and asymmetric facilitation contribute to the maintenance of diversity | 2020 | Wei et al. | Cold Spring Harbor Laboratory | rotl |
Modeling the Popularity of Twitter Hashtags with Master Equations | 2020 | Fontanelli & Mansilla | arXiv | rtweet |
A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales | 2020 | Young et al. | PLOS ONE | taxize, rgbif, rbison |
A permutation test and spatial cross-validation approach to assess models of interspecific competition between trees | 2020 | Allen & Kim | PLOS ONE | rotl |
Assessing the Risk of Car Crashes in Road Networks | 2020 | Borgoni et al. | Social Indicators Research | osmdata |
Identification of Trends in the Polish Media on the Example of the Quarterly Studia Medioznawcze The Use of Big Data Tools | 2020 | Pruchnik | Media Studies | hunspell |
Egyptian Rousette IFN-ω Subtypes Elicit Distinct Antiviral Effects and Transcriptional Responses in Conspecific Cells | 2020 | Pavlovich et al. | Frontiers in Immunology | rentrez |
Rise of the Machines? Examining the Influence of Social Bots on a Political Discussion Network | 2020 | Hagen et al. | Social Science Computer Review | rtweet |
On new data sources for the production of official statistics | 2020 | Salgado & Oancea | arXiv | RSelenium |
A database of freshwater fish species of the Amazon Basin | 2020 | Jézéquel et al. | Scientific Data | rfishbase |
Developing Standards for Improved Data Quality and for Selecting Fit for Use Biodiversity Data | 2020 | Chapman et al. | Biodiversity Information Science and Standards | rgbif |
Fast and automated sensory analysis: Using natural language processing for descriptive lexicon development | 2020 | Hamilton & Lahne | Food Quality and Preference | hunspell |
sen2r”: An R toolbox for automatically downloading and preprocessing Sentinel-2 satellite data | 2020 | Ranghetti et al. | Computers & Geosciences | geojsonio |
Poor condition promotes high-risk behaviours but context-dependency is key: A systematic review and meta-analysis | 2020 | Moran et al. | EcoEvoRxiv | rotl |
Expression and Localization of Kcne2 in the Vertebrate Retina | 2020 | Lindner et al. | Investigative Opthalmology & Visual Science | rotl |
Characterization of the chromatin accessibility in an Alzheimer’s disease (AD) mouse model | 2020 | Wang et al. | Alzheimer’s Research & Therapy | iheatmapr |
Analysis of Dual Class I Histone Deacetylase and Lysine Demethylase Inhibitor Domatinostat (4SC-202) on Growth and Cellular and Genomic Landscape of Atypical Teratoid/Rhabdoid | 2020 | Hoffman et al. | Cancers | ijtiff |
Efficient Bayesian Inference of General Gaussian Models on Large Phylogenetic Trees | 2020 | Bastide et al. | arXiv | treeio |
Visualizing 50 Years of Cancer Mortality Rates Across the US at Multiple Geographic Levels Using a Synchronized Map and Graph Animation | 2020 | Michaels et al. | Preventing Chronic Disease | magick |
Risk communication in tables versus text: a registered report randomized trial on “fact boxes | 2020 | Brick et al. | Royal Society Open Science | assertr |
Choice of clear-sky model in solar forecasting | 2020 | Yang | Journal of Renewable and Sustainable Energy | camsRad |
The ghosts of forests past and future: deforestation and botanical sampling in the Brazilian Amazon | 2020 | Stropp et al. | Ecography | rgbif |
20-MAD--20 Years of Issues and Commits of Mozilla and Apache Development | 2020 | Claes & Mäntylä | arXiv | tokenizers |
Trait velocities reveal that mortality has driven widespread coordinated shifts in forest hydraulic trait composition | 2020 | Trugman et al. | Proceedings of the National Academy of Sciences | brranching |
Mixture Touch: A Web Platform for the Evaluation of Complex Chemical Mixtures | 2020 | Zushi et al. | ACS Omega | webchem |
Vocal learning: Beyond the continuum | 2020 | Martins & Boeckx | PLOS Biology | taxize |
Synchronic and diachronic strategies of mora preservation in Gújjolaay Eegimaa | 2020 | Hantgan-Sonko | Journal of African Languages and Literatures | lingtypology |
The relationship between bioRxiv preprints, citations and altmetrics | 2020 | Fraser et al. | Quantitative Science Studies | RSelenium, rcrossref |
Latitudinal patterns of species richness and range size of ferns along elevational gradients at the transition from tropics to subtropics | 2020 | Hernández‐Rojas et al. | Journal of Biogeography | rgbif |
Shoot flammability of vascular plants is phylogenetically conserved and related to habitat fire-proneness and growth form | 2020 | Cui et al. | Nature Plants | rotl |
Optimization of the second internal transcribed spacer (ITS2) for characterizing land plants from soil | 2020 | Timpano et al. | PLOS ONE | taxize |
Molecular crosstalk between the endophyte Paraconiothyrium variabile and the phytopathogen Fusarium oxysporum – Modulation of lipoxygenase activity and beauvericin production during the interaction | 2020 | Bärenstrauch et al. | Fungal Genetics and Biology | rentrez |
Commuting inequity and its determinants in Shanghai: New findings from big-data analytics | 2020 | Zhao & Cao | Transport Policy | stplanr |
Spatial phylogenetics of the North American flora | 2020 | Mishler et al. | Journal of Systematics and Evolution | taxize |
Short Index of Job Satisfaction: Validity evidence from Portugal and Brazil | 2020 | Sinval & Marôco | PLOS ONE | skimr |
Relationships between survival and habitat suitability of semi‐aquatic mammals | 2020 | Barela et al. | Ecology and Evolution | MODIStsp |
Phylogeography and species distribution modeling reveal a historic disjunction for the conifer Podocarpus lambertii | 2020 | Bernardi et al. | Tree Genetics & Genomes | CoordinateCleaner |
Human access impacts biodiversity of microscopic animals in sandy beaches | 2020 | Martínez et al. | Communications Biology | rentrez |
Suggestions for Improving Invited Speaker Diversity To Reflect Trainee Diversity | 2020 | Hagan et al. | Journal of Microbiology & Biology Education | pdftools |
Ten questions concerning the microbiomes of buildings | 2016 | Adams et al. | Building and Environment | nlrx |
Harmonised global datasets of wind and solar farm locations and power | 2020 | Dunnett et al. | Scientific Data | osmdata |
Disease Ecology of Rickettsial Species: A Data Science Approach | 2020 | Morand et al. | Tropical Medicine and Infectious Disease | rotl |
Use and abuse of dietary supplements in persons with diabetes | 2020 | Hannon et al. | Nutrition & Diabetes | RSelenium |
Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds | 2020 | Chandler et al. | Life | taxize |
Identifying multiple learning spaces within a single teacher-focused Twitter hashtag | 2020 | Greenhalgh et al. | Computers & Education | rtweet |
Population variability under stressors is dependent on body mass growth and asymptotic body size | 2020 | Färber et al. | Royal Society Open Science | rfishbase |
Niche Models Differentiate Potential Impacts of Two Aquatic Invasive Plant Species on Native Macrophytes | 2020 | Verhoeven et al. | Diversity | taxize |
Remdesivir: A Review of Its Discovery and Development Leading to Emergency Use Authorization for Treatment of COVID-19 | 2020 | Eastman et al. | ACS Central Science | rnaturalearth |
Interaction of Plastics with Marine Species | 2020 | Ozturk & Altinok | Turkish Journal of Fisheries and Aquatic Sciences | rnaturalearth |
Emergence of diverse and specialized knowledge in a metropolitan tech cluster | 2020 | DellaPosta & Nee | Social Science Research | hunspell |
A taxonomic, phylogenetic, and functional comparison of restoration seed mixes and historical plant communities in Midwestern oak savannas | 2020 | Ladwig et al. | Forest Ecology and Management | taxize |
A critical assessment of human-impact indices based on anthropogenic pollen indicators | 2020 | Deza-Araujo et al. | Quaternary Science Reviews | neotoma |
Worldwide validation of 8 satellite-derived and reanalysis solar radiation products: A preliminary evaluation and overall metrics for hourly data over 27 years. Solar Energy | 2020 | Yang & Bright | Solar Energy | camsRad |
Potential impact of chemical stress on freshwater invertebrates: A sensitivity assessment on continental and national scale based on distribution patterns, biological traits, and relatedness | 2020 | Berg et al. | Science of The Total Environment | taxize |
Ragweed and sagebrush pollen can distinguish between vegetation types at broad spatial scales | 2020 | Carroll et al. | Ecosphere | neotoma |
The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma | 2020 | Kang et al. | BioMed Research International | UCSCXenaTools |
Multi-dimensional machine learning approaches for fruit shape phenotyping in strawberry | 2020 | Feldmann et al. | GigaScience | magick |
The social management of complex uncertainty: Central Bank similarity and crisis liquidity swaps at the Federal Reserve | 2020 | Marple | The Review of International Organizations | textreuse |
The genetic basis of animal behavioural diversity in natural populations | 2020 | Bubac et al. | Molecular Ecology | rotl |
Omics-wide quantitative B-cell infiltration analyses identify GPR18 for human cancer prognosis with superiority over CD20 | 2020 | Liu et al. | Communications Biology | UCSCXenaTools |
Model State Legislation and Intergovernmental Tensions over the Affordable Care Act, Common Core, and the Second Amendment | 2020 | Callaghan et al. | Publius: The Journal of Federalism | textreuse |
Evaluation of plant sources for antiinfective lead compound discovery by correlating phylogenetic, spatial, and bioactivity data | 2020 | Holzmeyer et al. | Proceedings of the National Academy of Sciences | geonames |
God Talk in a Digital Age: How Members of Congress Use Religious Language on Twitter | 2020 | Bramlett & Burge | Politics and Religion | rtweet |
Measuring Media Content Concentration at a Large Scale Using Automated Text Comparisons | 2020 | Vogler et al. | Journalism Studies | textreuse |
Standartox: Standardizing Toxicity Data | 2020 | Scharmüller et al. | Data | bib2df, plotly, rgbif, taxize, webchem |
Factors affecting urban electricity consumption: a case study in the Bangkok Metropolitan Area using an integrated approach of earth observation data and data analysis | 2020 | Nguyen et al. | Environmental Science and Pollution Research | MODIStsp |
[Twitter and Census Data Analytics to Explore Socioeconomic Factors for Post-COVID-19 Reopening Sentiment Twitter and Census Data Analytics to Explore Socioeconomic Factors for Post-COVID-19 Reopening Sentiment] | 2020 | Rahman et al. | arXiv | rtweet |
Use of random forest analysis to quantify the importance of the structural characteristics of beta-glucans for prebiotic development | 2020 | Lam et al. | Food Hydrocolloids | skimr |
A high-quality genetic reference database for European commercial fishes reveals substitution fraud of processed Atlantic cod (Gadus morhua) and common sole (Solea solea) at different steps in the Belgian supply chain | 2020 | Deconinck et al. | Food and Chemical Toxicology | rnaturalearth |
Specific leaf area is a potential indicator of tree species sensitive to future climate change in the mixed Subtropical Forests of southern Brazil | 2020 | Bohora Schlickmann et al. | Ecological Indicators | rgbif |
Group segmentation and heterogeneity in the choice of cooking fuels in post-earthquake Nepal | 2020 | Shrestha & Shrestha | arXiv | geojsonio |
Identifying Suspect Bat Reservoirs of Emerging Infections | 2020 | Crowley et al. | Vaccines | rotl, taxize |
Checklist of the vascular flora of the Sunda-Sahul Convergence Zone | 2020 | Joyce et al. | Biodiversity Data Journal | rgbif |
Urban aliens and threatened near-naturals: Land-cover affects the species richness of alien- and threatened species in an urban-rural setting | 2020 | Petersen et al. | Scientific Reports | rgbif |
Increased above‐ground resource allocation is a likely precursor for independent evolutionary origins of annuality in the Pooideae grass subfamily | 2020 | Lindberg et al. | New Phytologist | rgbif |
Species better track climate warming in the oceans than on land | 2020 | Lenoir et al. | Nature Ecology & Evolution | taxize, rgbif |
Follicular extracellular vesicles enhance meiotic resumption of domestic cat vitrified oocytes | 2020 | De Almeida Monteiro Melo Ferraz et al. | Scientific Reports | rentrez |
Climate and competition influence sockeye salmon population dynamics across the Northeast Pacific Ocean | 2020 | Connors et al. | Canadian Journal of Fisheries and Aquatic Sciences | rnaturalearth |
Sans forgetica is not desirable for learning | 2020 | Geller et al. | Center for Open Science | hunspell |
Bioeconomy futures: Expectation patterns of scientists and practitioners on the sustainability of bio‐based transformation | 2020 | Biber‐Freudenberger et al. | Sustainable Development | magick |
Trophic innovations fuel reef fish diversification | 2020 | Siqueira et al. | Nature Communications | rfishbase |
Sustainable and resilient strategies for touristic cities against COVID-19 | 2020 | D'Orazio et al. | arXiv | nlrx |
A guide to using the Internet to monitor and quantify the wildlife trade | 2020 | Stringham et al. | EcoEvoRxiv | RSelenium, taxize |
Sos Venezuela: an analysis of the anti-Maduro protest movements using Twitter | 2020 | Morselli et al. | Social Movement Studies | hunspell |
Growing Influence of University PR on Science News Coverage? A Longitudinal Automated Content Analysis of University Media Releases and Newspaper Coverage in Switzerland, 2003‒2017 | 2020 | Vogler & Schäfer | International Journal of Communication | textreuse |
webchem: An R Package to Retrieve Chemical Information from the Web | 2020 | Szöcs et al. | Journal of Statistical Software | taxize |
An experimental test of the capacity for long-distance dispersal of freshwater diatoms adhering to waterfowl plumage | 2020 | Manning et al. | Center for Open Science | rdryad |
The Topics-scape of the Pandemic Crisis: The Italian Sentiment on Political Leaders | 2020 | Greco & La Rocca | Culture e Studi del Sociale | rtweet |
Could climate trends disrupt the contact rates between Ixodes ricinus (Acari, Ixodidae) and the reservoirs of Borrelia burgdorferi s.l.? | 2020 | Fernández-Ruiz & Estrada-Peña | PLOS ONE | MODIStsp |
Climate, and not fire, drives the phylogenetic clustering of species with hard-coated seeds in Mediterranean Basin communities | 2020 | Santana et al. | Perspectives in Plant Ecology, Evolution and Systematics | brranching |
Climate niche mismatch and the collapse of primate seed dispersal services in the Amazon | 2020 | Sales et al. | Biological Conservation | spocc |
Focus and social contagion of environmental organization advocacy on Twitter | 2020 | Barrios‐O’Neill | Conservation Biology | rtweet |
Biogeography and ecological niche evolution in Diapensiaceae inferred from phylogenetic analysis | 2020 | Gaynor et al. | Journal of Systematics and Evolution | spocc, CoordinateCleaner |
Optimal MODIS data processing for accurate multi-year paddy rice area mapping in China | 2020 | Liu et al. | GIScience & Remote Sensing | MODIStsp |
A community approach to the Neotropical ticks-hosts interactions | 2020 | Estrada-Peña et al. | Scientific Reports | rotl |
Extraction on Paper Activity: An Active Learning Technique to Facilitate Student Understanding of Liquid–Liquid Extraction | 2020 | McKnelly et al. | Journal of Chemical Education | skimr |
Morphologically similar but not closely related: the long-spored species of Subulicystidium (Trechisporales, Basidiomycota | 2020 | Ordynets et al. | Mycological Progress | treeio |
Independent and dependent possessive person forms | 2020 | Ye | Studies in Language | lingtypology |
Dietary generalism accelerates arrival and persistence of coral‐reef fishes in their novel ranges under climate change | 2020 | Monaco et al. | Global Change Biology | taxize, rfishbase |
Climate drivers of plague epidemiology in British India, 1898–1949 | 2020 | Tennant et al. | Proceedings of the Royal Society B: Biological Sciences | tesseract |
Pan-Arctic analysis of cultural ecosystem services using social media and automated content analysis | 2020 | Runge et al. | Environmental Research Communications | rnaturalearth |
Movement of St. Louis encephalitis virus in the Western United States, 2014- 2018 | 2020 | Swetnam et al. | PLOS Neglected Tropical Diseases | rnaturalearth |
The impact of COVID-19 and strategies for mitigation and suppression in low- and middle-income countries | 2020 | Walker et al. | Science | rdhs |
Words ranking and Hirsch index for identifying the core of the hapaxes in political texts | 2020 | Ficcadenti et al. | Journal of Informetrics | hunspell |
Forty-four years of global trade in CITES-listed snakes: Trends and implications for conservation and public health | 2020 | Hierink et al. | Biological Conservation | rcites, citesdb |
Insights into high mobility group A (HMGA) proteins from Poaceae family: An in silico approach for studying homologs | 2020 | Pal Negi et al. | Computational Biology and Chemistry | taxize |
Co-occurrence networks of Twitter content after manual or automatic processing. A case-study on “gluten-free | 2020 | Puerta et al. | Food Quality and Preference | rtweet |
Gray wolf habitat use in response to visitor activity along roadways in Yellowstone National Park | 2020 | Anton et al. | Ecosphere | MODIStsp |
Climate warming moderates the impacts of introduced sportfish on multiple dimensions of prey biodiversity | 2020 | Loewen et al. | Global Change Biology | taxize |
Flight to Safety: 2020 Democratic Primary Election Results and COVID-19 | 2020 | Bisbee & Honig | Covid Economics | RSelenium |
Occupancy‐derived thermal affinities reflect known physiological thermal limits of marine species | 2020 | Webb et al. | Ecology and Evolution | worrms |
Changes in taxonomic and phylogenetic diversity in the Anthropocene | 2020 | Li et al. | Proceedings of the Royal Society B: Biological Sciences | taxize |
The internationalization of European financial networks: a quantitative text analysis of EU consultation responses | 2020 | James et al. | Review of International Political Economy | textreuse |
LTRpred: de novo annotation of intact retrotransposons | 2020 | Drost | Journal of Open Source Software | biomartr |
Areas of endemism on Brazilian mountaintops revealed by taxonomically verified records of Microlicieae (Melastomataceae | 2020 | Pacifico et al. | Phytotaxa | CoordinateCleaner |
Preceding Fall Drought Conditions and Overwinter Precipitation Effects on Spring Wildland Fire Activity in Canada | 2020 | Hanes et al. | Fire | weathercan |
Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum | 2020 | Burda et al. | Cell Reports | rotl |
Locked in Syndrome Machine Learning Classification using Sentence Comprehension EEG Data | 2020 | Corput | arXiv | osfr |
A geospatial infodemic: Mapping Twitter conspiracy theories of COVID-19 | 2020 | Stephens | Dialogues in Human Geography | rtweet |
Elusive consensus: Polarization in elite communication on the COVID-19 pandemic | 2020 | Green et al. | Science Advances | rtweet |
Investigate the sensitivity of the satellite-based agricultural drought indices to monitor the drought condition of paddy and introduction to enhanced multi-temporal agricultural drought indices | 2020 | Jayawardhana & Chathurange | J Remote Sens GIS | MODIStsp |
Forecasting Brazilian and American COVID-19 cases based on artificial intelligence coupled with climatic exogenous variables | 2020 | Da Silva et al. | Chaos, Solitons & Fractals | rnoaa |
The R Language as a Tool for Biometeorological Research | 2020 | Charalampopoulos | Atmosphere | rnoaa, rWBclimate, nasapower |
Integrated pharmaco-proteogenomics defines two subgroups in isocitrate dehydrogenase wild-type glioblastoma with prognostic and therapeutic opportunities | 2020 | Oh et al. | Nature Communications | rentrez |
Recent accelerated diversification in rosids occurred outside the tropics | 2020 | Sun et al. | Nature Communications | rgbif |
Foraging habitat determines predator–prey size relationships in marine fishes | 2020 | Griffiths | Journal of Fish Biology | rfishbase |
Chloroplast DNA analysis of the invasive weed, Himalayan balsam (Impatiens glandulifera), in the British Isles | 2020 | Kurose et al. | Scientific Reports | rnaturalearth |
Natural variations in brain morphology do not account for inter-individual differences in defensive responding during fear acquisition training and extinction | 2020 | Ehlers et al. | PsyArXiv | writexl |
MARES, a replicable pipeline and curated reference database for marine eukaryote metabarcoding | 2020 | Arranz et al. | Scientific Data | bold, taxize |
Evolution of Statistical Software and Quantitative Methods | 2020 | LeBeau & Aloe | The University of Iowa | bib2df |
Transfer learning of regression models from a sequence of datasets by penalized estimation | 2020 | Wieringen & Binder | arXiv | fingertipsR |
Native distribution characteristics rather than functional traits explain preadaptation of invasive species to high‐UV‐B environments | 2020 | Hock et al. | Diversity and Distributions | rgbif |
Global biogeography of marine dispersal potential | 2020 | Álvarez-Noriega et al. | Nature Ecology & Evolution | rotl |
GAB2 and GAB3 are expressed in a tumor stage-, grade- and histotype-dependent manner and are associated with shorter progression-free survival in ovarian cancer | 2020 | Berkel & Cacan | Journal of Cell Communication and Signaling | pdftools, magick |
Web Scraping in the Statistics and Data Science Curriculum: Challenges and Opportunities | 2020 | Dogucu & Çetinkaya-Rundel | Journal of Statistics Education | rtweet, robotstxt |
NEPA and National Trends in Federal Infrastructure Siting in the United States | 2020 | Scott et al. | Review of Policy Research | pdftools, tokenizers |
Insect occurrence in agricultural land‐uses depends on realized niche and geographic range properties | 2020 | Waldock et al. | Ecography | CoordinateCleaner |
Nonlinear kernels, dominance, and envirotyping data increase the accuracy of genome-based prediction in multi-environment trials | 2020 | Costa-Neto et al. | Heredity | nasapower |
covid19. analytics: An R Package to Obtain, Analyze and Visualize Data from the Corona Virus Disease Pandemic | 2020 | Ponce & Sandhel | arXiv | rentrez |
Predicting egg size across temperatures in marine teleost fishes | 2020 | Anderson & Gillooly | Fish and Fisheries | rfishbase |
Key factors driving obesity in the UK | 2020 | Stevens et al. | | fingertipsR |
The potential current distribution of the coypu (Myocastor coypus) in Europe and climate change induced shifts in the near future | 2020 | Schertler et al. | NeoBiota | rgbif |
Gender, seniority, and self-citation practices in political science | 2020 | Dion et al. | Scientometrics | rcrossref |
RNA sequencing identifies transcriptional changes in the rabbit larynx in response to low humidity challenge | 2020 | Bailey et al. | Research Square | biomartr |
dfoliatR: An R package for detection and analysis of insect defoliation signals in tree rings | 2020 | Guiterman et al. | Dendrochronologia | MtreeRing |
Identifying and Controlling for Variation in Canid Harvest Data | 2020 | Bauder et al. | The Journal of Wildlife Management | rnoaa |
A Fresh Look at Introductory Data Science | 2020 | Çetinkaya-Rundel & Ellison | Journal of Statistics Education | gutenbergr |
Assessment of species gaps in DNA barcode libraries of non-indigenous species (NIS) occurring in European coastal regions | 2020 | Duarte et al. | Metabarcoding and Metagenomics | rentrez |
Optimal sampling design for spatial capture-recapture | 2020 | Dupont et al. | Cold Spring Harbor Laboratory | NLMR |
Small Area Estimation for Crime Analysis | 2020 | Buil-Gil | Center for Open Science | essurvey |
Ibuprofen Narratives in Five European Countries During the COVID-19 Pandemic | 2020 | Xaudiera & Cardenal | Harvard Kennedy School Misinformation Review | rtweet |
From advocacy to acceptance: Social media discussions of protected bike lane installations | 2020 | Ferster et al. | Urban Studies | rtweet |
The Parkinson’s Disease Genome‐Wide Association Study Locus Browser. Movement Disorders | 2020 | Grenn et al. | Movement Disorders | rentrez |
Raccoon Pelt Price and Trapper Harvest Relationships Are Temporally Inconsistent | 2020 | Bauder et al. | The Journal of Wildlife Management | rnoaa |
Living with floating vegetation invasions | 2020 | Kleinschroth et al. | Ambio | rnoaa |
Voting and Social Media-Based Political Participation | 2020 | Göbel | Center for Open Science | RSelenium |
Achieving sustainable exploitation through co-management in three Chilean small-scale fisheries | 2020 | Roa-Ureta et al. | Fisheries Research | pdftools |
Temperature and salinity, not acidification, predict near-future larval growth and larval habitat suitability of Olympia oysters in the Salish Sea | 2020 | Lawlor & Arellano | Scientific Reports | rnaturalearth |
A field comes of age: tracking research on the internet within communication studies | 2020 | Puschmann & Pentzold | Internet Histories | rcrossref |
A spatial-temporal approach to modeling somatic growth across inland recreational fisheries landscapes | 2020 | Cahill et al. | Canadian Journal of Fisheries and Aquatic Sciences | rnaturalearth |
Evaluating shortfalls and spatial accuracy of biodiversity documentation in the Atlantic Forest, the most diverse and threatened Brazilian phytogeographic domain | 2020 | Colli‐Silva et al. | TAXON | CoordinateCleaner |
Integrative transcriptomics reveals genotypic impact on sugar beet storability | 2020 | Madritsch et al. | Plant Molecular Biology | rentrez |
What You Can Scrape and What Is Right to Scrape: A Proposal for a Tool to Collect Public Facebook Data | 2020 | Mancosu & Vegetti | Social Media + Society | RSelenium |
Space-Time Smoothing of Demographic and Health Indicators using the R Package SUMMER | 2020 | Li et al. | arXiv | rdhs |
PlatCOVID: A Novel Web Tool to Analyze, Curate and Share COVID-19 Literature | 2020 | Brandão et al. | Research Square | rentrez |
Do key innovations unlock diversification? A case-study on the morphological and ecological impact of pharyngognathy in acanthomorph fishes | 2020 | Larouche et al. | Current Zoology | rfishbase |
Measuring the long-term success of small-scale marine protected areas in a Philippine reef fishery | 2020 | Bayley et al. | Coral Reefs | rfishbase |
Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems | 2020 | Carraro et al. | Nature Communications | rentrez, taxize |
Relaxation of purifying selection suggests low effective population size in eusocial Hymenoptera and solitary pollinating bees | 2020 | Weyna & Romiguier | Cold Spring Harbor Laboratory | rgbif |
Adaptation and coordinated evolution of plant hydraulic traits | 2020 | Sanchez‐Martinez et al. | Ecology Letters | CoordinateCleaner, rgbif |
Quantifying shifts in topic popularity over 44 years of Austral Ecology | 2020 | Westgate et al. | Austral Ecology | pdftools |
Gluten intake and metabolic health: conflicting findings from the UK Biobank | 2020 | Behrendt et al. | European Journal of Nutrition | skimr |
Impacts of Global Climate Change on Duration of Logging Season in Siberian Boreal Forests | 2020 | Chugunkova & Pyzhev | Forests | rnaturalearth |
Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago | 2020 | Kakioka et al. | Research Square | rnaturalearth |
Integrating Life Cycle and Impact Assessments to Map Food’s Cumulative Environmental Footprint | 2020 | Kuempel et al. | One Earth | NLMR |
The impact of COVID-19 lockdown on food priorities. Results from a preliminary study using social media and an online survey with Spanish consumers | 2020 | Laguna et al. | Food Quality and Preference | rtweet |
Central Role for Adipocyte Na,K-ATPase Oxidant Amplification Loop in the Pathogenesis of Experimental Uremic Cardiomyopathy | 2020 | Sodhi et al. | Journal of the American Society of Nephrology | magick |
Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm | 2020 | Yeşilkanat | Chaos, Solitons & Fractals | rnaturalearth |
How traders influence their neighbours: Modelling social evolutionary processes and peer effects in agricultural trade networks | 2020 | Kopp & Salecker | Journal of Economic Dynamics and Control | nlrx |
Self-efficacy, mental models and team adaptation: A first approach on football and futsal refereeing | 2021 | Aragão et al. | Psychology of Sport and Exercise | skimr |
The biogeography of the megadiverse genus Anthurium (Araceae | 2020 | Reimuth & Zotz | Botanical Journal of the Linnean Society | CoordinateCleaner |
Bats as putative Zaire ebolavirus reservoir hosts and their habitat suitability in Africa | 2020 | Koch et al. | Scientific Reports | rgbif |
Reef-associated fishes have more maneuverable body shapes at a macroevolutionary scale | 2020 | Larouche et al. | Coral Reefs | rfishbase |
Conservation Gaps in Traditional Vegetables Native to Europe and Fennoscandia | 2020 | De Sousa & Solberg | Agriculture | rgbif |
Identifying hotspots of invasive alien terrestrial vertebrates in Europe to assist transboundary prevention and control | 2020 | Polaina et al. | Scientific Reports | rgbif, CoordinateCleaner |
R: A Language for Data Analysis and Graphics | 1996 | Ihaka & Gentleman | Journal of Computational and Graphical Statistics | rentrez |
Habitat suitability models for the imperiled wood turtle (Glyptemys insculpta) raise concerns for the species’ persistence under future climate change | 2020 | Mothes et al. | Global Ecology and Conservation | CoordinateCleaner |
Peanut FAD2 Genotype and Growing Location Interactions Significantly Affect the Level of Oleic Acid in Seeds | 2020 | Tonnis et al. | Journal of the American Oil Chemists’ Society | rnoaa |
| 2020 | Da Silva Abel et al. | Environment, Development and Sustainability | MODIStsp |
Estimating Rainfall Erosivity from Daily Precipitation Using Generalized Additive Models | 2020 | Vantas et al. | Environmental Sciences Proceedings | hydroscoper |
Continuous expansion of the geographic range linked to realized niche expansion in the invasive Mourning gecko Lepidodactylus lugubris (Duméril & Bibron, 1836 | 2020 | Nania et al. | PLOS ONE | CoordinateCleaner |
The relationship between trophic level and body size in fishes depends on functional traits | 2020 | Keppeler et al. | Ecological Monographs | rfishbase |
Exploring social media data to understand consumers’ perception of eggs: A multilingual study using Twitter | 2020 | Sass et al. | Journal of Sensory Studies | rtweet |
A meta-analysis of factors influencing the strength of mate-choice copying in animals | 2020 | Davies et al. | Behavioral Ecology | rotl |
The macroecology and evolution of avian competence for Borrelia burgdorferi | 2020 | Becker & Han | Cold Spring Harbor Laboratory | rredlist |
Simultaneously operating threats cannot predict extinction risk | 2020 | Greenville et al. | Conservation Letters | rredlist |
Mammals of Paso Centurión, an area with relicts of Atlantic Forest in Uruguay | 2020 | Grattarola & Rodríguez-Tricot | Neotropical Biology and Conservation | taxize |
Hi-C pipeline development for linking resistome and mobilome to the microbiome of wastewater samples | 2020 | Calderón Franco | | taxize |
Complexity, Resources, and Text Borrowing in State Legislatures | 2020 | Hansen & Jansa | | textreuse |
Landscape Analysis for the Specimen Data Refinery | 2020 | Walton et al. | Research Ideas and Outcomes | taxize |
The Global Urban Tree Inventory: A database of the diverse tree flora that inhabits the world’s cities | 2020 | Ossola et al. | Global Ecology and Biogeography | taxize |
Herbivores at the highest risk of extinction among mammals, birds, and reptiles | 2020 | Atwood et al. | Science Advances | taxize |
Travel flow aggregation: Nationally scalable methods for interactive and online visualisation of transport behaviour at the road network level | 2020 | Morgan & Lovelace | Environment and Planning B: Urban Analytics and City Science | stplanr |
Twentieth-century emergence of antimicrobial resistant human- and bovine-associated Salmonella enterica serotype Typhimurium lineages in New York State | 2020 | Carroll et al. | Scientific Reports | treeio |
[Inference of Nipah virus Evolution Virus Evolution] | 2020 | Whitmer et al. | Virus Evolution | treeio |
Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina | 2020 | Ettinger & Eisen | PLOS ONE | treeio |
Dark and bright patterns in cookie consent requests | 2020 | Grassl et al. | Center for Open Science | tokenizers |
Dynamic Courtship Signals and Mate Preferences in Sepia plangon | 2020 | López Galán et al. | Frontiers in Physiology | tokenizers |
PlatCOVID: A Novel Web Tool to Analyze, Curate and Share COVID-19 Literature | 2020 | Brandão et al. | Research Square | tokenizers |
UCSCXenaShiny: An R Package for Exploring and Analyzing UCSC Xena Public Datasets in Web Browser | 2020 | Wang et al. | MDPI AG | UCSCXenaTools |
Expanding the Measurement of Culture with a Sample of Two Billion Humans | 2020 | Obradovich et al. | National Bureau of Economic Research | rnaturalearth |
Fenología de los ecosistemas de alta montaña en Andalucía: Análisis de la tendencia estacional del SAVI (2000-2019 | 2020 | Gutiérrez-Hernández | Pirineos | MODIStsp |
The geography of publishing in the Anthropocene | 2020 | Hazlett et al. | Conservation Science and Practice | refsplitr |
Protect or perish: Quantitative analysis of state‐level species protection supports preservation of the Endangered Species Act | 2020 | Mothes et al. | Conservation Letters | rredlist, natserv |
An open-access occurrence database for Andean bears in Peru | 2020 | Falconi et al. | Ursus | rgbif |
Lists of Chemical Warfare Agents and Precursors from International Nonproliferation Frameworks: Structural Annotation and Chemical Fingerprint Analysis | 2020 | Costanzi et al. | Journal of Chemical Information and Modeling | webchem |
Botryosphaeriaceae species on forest trees in Portugal: diversity, distribution and pathogenicity | 2020 | Batista et al. | European Journal of Plant Pathology | rentrez |
Keystone predators govern the pathway and pace of climate impacts in a subarctic marine ecosystem | 2020 | Rasher et al. | Science | rnoaa |
Diversity of monogeneans and tapeworms in cypriniform fishes across two continents | 2020 | Kuchta et al. | International Journal for Parasitology | rotl |
High silicon concentrations in grasses are linked to environmental conditions and not associated with C4 photosynthesis | 2020 | Brightly et al. | Global Change Biology | rgbif, CoordinateCleaner |
SAPHIR: a Shiny application to analyze tissue section images | 2020 | Germani et al. | F1000Research | ijtiff |
Spatial Fingerprint of Younger Dryas Cooling and Warming in Eastern North America | 2020 | Fastovich et al. | Geophysical Research Letters | neotoma |
Passive acoustic listening stations (PALS) show rapid onset of ecological effects of harmful algal blooms in real time | 2020 | Rycyk et al. | Scientific Reports | rnaturalearth |
Exploring aflatoxin contamination and household-level exposure risk in diverse Indian food systems | 2020 | Wenndt et al. | PLOS ONE | rnaturalearth |
Biocontrol of aflatoxin in corn by inoculation with non-aflatoxigenicAspergillus flavusisolates | 2006 | Abbas et al. | Biocontrol Science and Technology | rnaturalearth |
Upwelling-induced trace gas dynamics in the Baltic Sea inferred from 8 years of autonomous measurements on a ship of opportunity | 2020 | Jacobs et al. | Copernicus GmbH | rnaturalearth |
A new patient registry for Chagas disease | 2020 | Hotez et al. | PLOS Neglected Tropical Diseases | rnaturalearth |
A computer vision approach to assess wood variability from whole-disk images of longleaf pine | 2020 | Raut | | rnaturalearth |
A spatiotemporal comparison of length-at-age in the coral reef fish Acanthurus nigrofuscus between marine reserves and fished reefs | 2020 | Cramer et al. | PLOS ONE | rnaturalearth |
Evaluating the transferability of empirical models of debris-covered glacier melt | 2020 | Winter-Billington et al. | Journal of Glaciology | rnaturalearth |
Data-driven inference of unknown tilt and azimuth of distributed PV systems | 2020 | Meng et al. | Solar Energy | camsRad |
Weak phylogenetic and climatic signals in plant heat tolerance | 2020 | Perez & Feeley | Journal of Biogeography | brranching, phylocomr |
Thousands of reptile species threatened by under-regulated global trade | 2020 | Marshall et al. | Nature Communications | pdftools |
A global test of Allen’s rule in rodents | 2020 | Alhajeri et al. | Global Ecology and Biogeography | rredlist |
Non-additive genetic effects induce novel phenotypic distributions in male mating traits of F1 hybrids | 2020 | Atsumi et al. | EcoEvoRxiv | rotl |
Global gaps in trait data for terrestrial vertebrates | 2020 | Etard et al. | Global Ecology and Biogeography | rredlist, taxize |
Evolutionary dynamics in the Anthropocene: Life history and intensity of human contact shape antipredator responses | 2020 | Geffroy et al. | PLOS Biology | rotl |
Functional and phylogenetic diversity promote litter decomposition across terrestrial ecosystems | 2020 | Xiao et al. | Global Ecology and Biogeography | rotl |
Trait‐based ecology at large scales: Assessing functional trait correlations, phylogenetic constraints and spatial variability using open data | 2020 | Wilkes et al. | Global Change Biology | rotl, bold |
The Open-Access Availability of Criminological Research to Practitioners and Policy Makers | 2020 | Ashby | Journal of Criminal Justice Education | roadoi, rromeo |
Comparison of Atmospheric Fungal Spore Concentrations between Two Main Cities in the Caribbean Basin | 2020 | Rivera-Mariani et al. | Puerto Rico Health Sciences Journal | rnoaa |
Challenging a Global Land Surface Model in a Local Socio-Environmental System | 2020 | Dahlin et al. | Land | rnoaa |
Climatic niche predicts the landscape structure of locally adaptive standing genetic variation | 2019 | Chhatre et al. | Cold Spring Harbor Laboratory | rnoaa |
[Advancing frost dates have reduced frost risk among most North American angiosperms since Global Change Biology] | 2020 | Park et al. | Global Change Biology | rnoaa |
Mismatched spatial scales can limit the utility of citizen science data for estimating wildlife‐habitat relationships | 2020 | Bauder et al. | Ecological Research | rnoaa |
Successful breeding predicts divorce in plovers | 2020 | Halimubieke et al. | Scientific Reports | rnoaa, GSODR |
Habitat use across multiple scales suggests resilience to rising seas for endangered island endemic compared to sympatric invasive species | 2020 | Taillie et al. | Animal Conservation | rnoaa |
Random forest classification to determine environmental drivers and forecast paralytic shellfish toxins in Southeast Alaska with high temporal resolution | 2020 | Harley et al. | Harmful Algae | rnoaa |
Pollen-based climate reconstruction techniques for late Quaternary studies | 2020 | Chevalier et al. | Earth-Science Reviews | neotoma |
The impacts of climate change on fish growth: A summary of conducted studies and current knowledge | 2021 | Huang et al. | Ecological Indicators | brranching, rfishbase |
Biogeographic parallels in thermal tolerance and gene expression variation under temperature stress in a widespread bumble bee | 2020 | Pimsler et al. | Scientific Reports | biomartr |
Graph-based exploitation of gene ontology using GOxploreR for scrutinizing biological significance | 2020 | Manjang et al. | Scientific Reports | biomartr |
On the design, implementation, and use of laziness in R | 2019 | Goel & Vitek | Proceedings of the ACM on Programming Languages | assertr |
Single-Nucleus RNA-Seq Is Not Suitable for Detection of Microglial Activation Genes in Humans | 2020 | Thrupp et al. | Cell Reports | biomartr |
Does Interviewers’ Age Affect Their Assessment of Respondents’ Understanding of Survey Questions? Evidence From the European Social Survey | 2020 | Życzyńska-Ciołek & Kołczyńska | International Journal of Public Opinion Research | essurvey |
Reptiles on the wrong track? Moving beyond traditional estimators with dynamic Brownian Bridge Movement Models | 2020 | Silva et al. | Movement Ecology | NLMR |
Analysing point patterns on networks — A review | 2020 | Baddeley et al. | Spatial Statistics | osmdata, stplanr |
Normative Discrimination and the Motherhood Penalty | 2010 | Benard & Correll | Gender & Society | rcrossref |
dietr: an R package for calculating fractional trophic levels from quantitative and qualitative diet data | 2020 | Borstein | Hydrobiologia | rfishbase |
Global analysis of fish growth rates shows weaker responses to temperature than metabolic predictions | 2020 | Denderen et al. | Global Ecology and Biogeography | rfishbase |
Standardized data to support conservation prioritization for sharks and batoids (Elasmobranchii | 2020 | Oegelund Nielsen et al. | Data in Brief | rfishbase, taxize |
The interacting effect of habitat amount, habitat diversity and fragmentation on insect diversity along elevational gradients | 2020 | Dianzinga et al. | Journal of Biogeography | rgbif |
Fisheries-induced selection against schooling behaviour in marine fishes | 2020 | Guerra et al. | Proceedings of the Royal Society B: Biological Sciences | rfishbase |
Linking dimensions of data on global marine animal diversity | 2020 | Webb & Vanhoorne | Philosophical Transactions of the Royal Society B: Biological Sciences | rfishbase, worrms |
Individual back-calculated size-at-age based on otoliths from Pacific coral reef fish species | 2020 | Morat et al. | Scientific Data | rfishbase |
Biodiversidata: A novel dataset for the vascular plant species diversity in Uruguay | 2020 | Grattarola et al. | Biodiversity Data Journal | taxize, rgbif, geonames |
Climate drives the geography of marine consumption by changing predator communities | 2020 | Whalen et al. | Proceedings of the National Academy of Sciences | rfishbase |
Disentangling the influence of geographical laws and sampling biais to model distribution of Birch tree from Open-acess Biodiversity Dataset (OBDs) in Swedish Lapland | 2020 | Courault et al. | | rgbif |
The transboundary nature of the world’s exploited marine species | 2020 | Palacios-Abrantes et al. | Scientific Reports | rfishbase |
Predictive ability of a process‐based versus a correlative species distribution model | 2020 | Higgins et al. | Ecology and Evolution | rgbif |
The fossil record of extant elasmobranchs | 2020 | Paillard et al. | Journal of Fish Biology | rfishbase |
A data-driven evaluation of lichen climate change indicators in Central Europe | 2020 | Nelsen & Lumbsch | Biodiversity and Conservation | rgbif |
A simple graph theoretic method provides accurate range area estimates | 2020 | Alroy | Authorea Preprints | rgbif |
Distributional records of Ross Sea (Antarctica) planktic Copepoda from bibliographic data and samples curated at the Italian National Antarctic Museum (MNA): checklist of species collected in the Ross Sea sector from 1987 to 1995 | 2020 | Bonello et al. | ZooKeys | spocc |
PSA Kinetics as Prognostic Markers of Overall Survival in Patients with Metastatic Castration-Resistant Prostate Cancer Treated with Abiraterone Acetate | 2020 | España et al. | Cancer Management and Research | skimr |
Observer‐oriented approach improves species distribution models from citizen science data | 2020 | Milanesi et al. | Ecology and Evolution | spocc, rinat |
High individual pain variability in people living with HIV: A graphical analysis | 2020 | Wadley et al. | European Journal of Pain | skimr |
High cryptic diversity in the kleptoparasitic genus Hyalorisia Dall, 1889 (Littorinimorpha: Capulidae) with the description of nine new species from the Indo-West Pacific | 2020 | Fassio et al. | Journal of Molluscan Studies | mapr, spocc |
Range edges of North American marine species are tracking temperature over decades | 2020 | Fredston et al. | Authorea Preprints | taxize |
Tradeoffs with growth limit host range in complex life cycle helminths | 2020 | Benesh et al. | The American Naturalist | taxize |
Progress in the R ecosystem for representing and handling spatial data | 2020 | Bivand | Journal of Geographical Systems | stplanr |
Global distribution and conservation status of ecologically rare mammal and bird species | 2020 | Loiseau et al. | Nature Communications | taxize |
Comparing metabarcoding and morphological approaches to identify phytoplankton taxa associated with harmful algal blooms | 2020 | Esenkulova et al. | FACETS | taxize |
Global root traits (GRooT) database | 2020 | Guerrero‐Ramírez et al. | Global Ecology and Biogeography | taxize |
Fine-scale tundra vegetation patterns are strongly related to winter thermal conditions | 2020 | Niittynen et al. | Nature Climate Change | taxize |
The problem and promise of scale in multilayer animal social networks | 2020 | Robitaille et al. | Current Zoology | spatsoc, grainchanger |
Quantification of colorimetric isothermal amplification on the smartphone and its open-source app for point-of-care pathogen detection | 2020 | Nguyen et al. | Scientific Reports | colocr |
DTI-SNNFRA: Drug-Target interaction prediction by shared nearest neighbors and fuzzy-rough approximation | 2020 | Islam et al. | arXiv | webchem |
Data Input and Output | 2020 | Wiley & Wiley | Beginning R | writexl |
BnaSNPDB: An interactive web portal for the efficient retrieval and analysis of SNPs among 1,007 rapeseed accessions | 2020 | Yan et al. | Computational and Structural Biotechnology Journal | writexl |
Meta-Analysis of the Effects of Voting Advice Applications | 2020 | Munzert & Ramirez-Ruiz | Center for Open Science | writexl |
| 2020 | Pregla et al. | Center for Open Science | magick |
Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem | 2020 | Parent et al. | Plants | weathercan |
Whose Tweets on COVID-19 Gain the Most Attention: Celebrities, Political, or Scientific Authorities? Cyberpsychology, Behavior, and Social Networking | 2020 | Kamiński et al. | Cyberpsychology, Behavior, and Social Networking | rtweet |
A semi-automated organoid screening method demonstrates epigenetic control of intestinal epithelial differentiation | 2020 | Ostrop et al. | Cold Spring Harbor Laboratory | magick |
Discovery and Validation of Urinary Molecular Signature of Early Sepsis | 2020 | Bandyopadhyay et al. | Critical Care Explorations | rentrez |
Multispecies models reveal that eDNA metabarcoding is more sensitive than backpack electrofishing for conducting fish surveys in freshwater streams | 2020 | McColl‐Gausden et al. | Molecular Ecology | rentrez |
Modelling the potential spread of Hyalomma marginatum ticks in Europe by migratory birds | 2020 | Estrada-Peña et al. | International Journal for Parasitology | MODIStsp |
Fire regime in Southern Brazil driven by atmospheric variation and vegetation cover | 2020 | De Andrade et al. | Agricultural and Forest Meteorology | MODIStsp |
Setting socially mediated engagement parameters: A topic modeling and text analytic approach to examining polarized discourses on Gillette’s campaign | 2020 | Xu & Xiong | Public Relations Review | rtweet |
The demand for cycle sharing: Examining the links between weather conditions, air quality levels, and cycling demand for regular and casual users | 2020 | Morton | Journal of Transport Geography | bikedata |
Describing and mapping diversity and accessibility of the urban food environment with open data and tools | 2020 | Cervigni et al. | Applied Geography | osmdata |
The impacts of climate change on fish growth: A summary of conducted studies and current knowledge | 2021 | Huang et al. | Ecological Indicators | rfishbase, brranching |
Parental Birth-Related PTSD Symptoms and Bonding in the Early Postpartum Period: A Prospective Population-Based Cohort Study | 2020 | Stuijfzand et al. | Frontiers in Psychiatry | visdat |
Plant and fungal collections: Current status, future perspectives | 2020 | Paton et al. | PLANTS, PEOPLE, PLANET | CoordinateCleaner |
AI Naturalists Might Hold the Key to Unlocking Biodiversity Data in Social Media Imagery | 2020 | August et al. | Patterns | photosearcher |
Grapevine – Downy Mildew <em>Rendez-Vous</em>: Proteome Analysis of the First Hours of an Incompatible Interaction | 2020 | Santos et al. | MDPI AG | rentrez |
Finding the bird’s wings: Dimensions of factional conflict on Twitter | 2020 | Sältzer | Party Politics | rtweet |
Disproportionate extinction of South American mammals drove the asymmetry of the Great American Biotic Interchange | 2020 | Carrillo et al. | Proceedings of the National Academy of Sciences | paleobioDB, CoordinateCleaner |
TreeSummarizedExperiment: a S4 class for data with hierarchical structure | 2020 | Huang et al. | F1000Research | treeio |
Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus | 2020 | Tabima et al. | G3 Genes|Genomes|Genetics | rentrez |
The First 60 Days: American Public Health Agencies’ Social Media Strategies in the Emerging COVID-19 Pandemic | 2020 | Sutton et al. | Health Security | rtweet |
A targeted phylogenetic approach helps explain New World functional diversity patterns of two eudicot lineages | 2020 | Figueroa & Smith | Journal of Biogeography | treeio, CoordinateCleaner |
Automatic Tree Ring Detection using Jacobi Sets | 2020 | Makela et al. | arXiv | MtreeRing |
Online Learning Communities in the COVID-19 Pandemic: Social Learning Network Analysis of Twitter during the Shutdown | 2020 | Lemay & Doleck | International Journal of Learning Analytics and Artificial Intelligence for Education (iJAI | rtweet |
Evaluation of Different Objective Functions Used in the SUFI-2 Calibration Process of SWAT-CUP on Water Balance Analysis: A Case Study of the Pursat River Basin, Cambodia | 2020 | Sao et al. | Water | MODIStsp |
Gender Disparities in Authorships and Citations in Transplantation Research | 2020 | Benjamens et al. | Transplantation direct | bib2df |
Aedes albopictus and Aedes flavopictus (Diptera: Culicidae) pre-imaginal abundance patterns are associated with different environmental factors along an altitudinal gradient | 2021 | Chaves & Friberg | Current Research in Insect Science | MODIStsp |
On Construction and Estimation of Stationary Mixture Transition Distribution Models | 2020 | Zheng et al. | arXiv | hddtools |
The Impact of Individual's Ecological Factors on the Dynamics of Alcohol Drinking among Arizona State University Students: An Application of the Survey Data-driven Agent-based Model | 2020 | Azizi et al. | arXiv | nlrx |
Open Innovation in Digital Healthcare: Users’ Discrimination between Certified and Non-Certified mHealth Applications | 2020 | Gessa et al. | Journal of Open Innovation: Technology, Market, and Complexity | RSelenium |
High individual pain variability in people living with HIV: A graphical analysis | 2020 | Wadley et al. | Eur J Pain | skimr |
Ecosystem service lens reveals diverse community values of small-scale fisheries | 2020 | Pellowe & Leslie | Ambio | rnaturalearth |
A survey of biodiversity informatics: Concepts, practices, and challenges | 2020 | Gadelha et al. | WIREs Data Mining and Knowledge Discovery | rgbif |
Projecting marine developmental diversity and connectivity in future oceans | 2020 | Marshall & Alvarez-Noriega | Philosophical Transactions of the Royal Society B: Biological Sciences | rotl |
Gendered Tweets: Computational Text Analysis of Gender Differences in Political Discussion on Twitter | 2020 | Hu & Kearney | Journal of Language and Social Psychology | rtweet |
Temporal variability in production is not consistently affected by global change drivers across herbaceous-dominated ecosystems | 2020 | Avolio et al. | Oecologia | rnoaa |
Hastichthys totonacus sp. nov., a North American Turonian dercetid fish (Teleostei, Aulopiformes) from the Huehuetla quarry, Puebla, Mexico | 2021 | Alvarado-Ortega & Díaz-Cruz | Journal of South American Earth Sciences | phylogram, treeio |
Naturalised plants transform the composition and function of the New Zealand flora | 2020 | Brandt et al. | Biological Invasions | rgbif |
The macroecology of fish migration | 2020 | Alò et al. | Global Ecology and Biogeography | rgbif, rredlist |
Quantifying Plasmodium falciparum infections clustering within households to inform household-based intervention strategies for malaria control programs: An observational study and meta-analysis from 41 malaria-endemic countries | 2020 | Stresman et al. | PLOS Medicine | rdhs, rnaturalearth |
Long-term survey of sea turtles (Caretta caretta) reveals correlations between parasite infection, feeding ecology, reproductive success and population dynamics | 2020 | Lockley et al. | Scientific Reports | rnaturalearth |
Using botanic gardens and arboreta to help identify urban trees for the future | 2020 | Hirons et al. | PLANTS, PEOPLE, PLANET | rnaturalearth |
Beyond Imperviousness: The Role of Antecedent Wetness in Runoff Generation in Urbanized Catchments | 2020 | Saadi et al. | Water Resources Research | FedData |
Resprouting grasses are associated with less frequent fire than seeders | 2020 | Simpson et al. | New Phytologist | rgbif, CoordinateCleaner |
Responding Effectively to Customer Feedback on Twitter: A Mixed Methods Study of Webcare Styles | 2020 | Fuoli et al. | Applied Linguistics | rtweet |
Incorporating time into the traditional correlational distributional modelling framework: A proof‐of‐concept using the Wood Thrush Hylocichla mustelina | 2020 | Ingenloff & Peterson | Methods in Ecology and Evolution | magick |
Environmental niche and functional role similarity between invasive and native palms in the Atlantic Forest | 2020 | Bello et al. | Biological Invasions | CoordinateCleaner |
Using the novel priority index in prioritizing the selection of inland water bodies for site-based fish species conservation | 2020 | Basooma et al. | | rgbif |
Is sustainability advertising just a public relations stunt? | 2020 | Johnson & Greenwell | Center for Open Science | rtweet |
Measuring Open Access Uptake: Data Sources, Expectations, and Misconceptions | 2020 | Robinson-Garcia et al. | Scholarly Assessment Reports | roadoi |
A Geometric Morphometric Analysis of Geographic Mandibular Variation in the Dwarf Gerbil Gerbillus nanus (Gerbillinae, Rodentia | 2020 | Alhajeri | Journal of Mammalian Evolution | rnaturalearth |
Phenotypic variation, functional traits repeatability and core collection inference in Synsepalum dulcificum (Schumach & Thonn.) Daniell reveals the Dahomey Gap as a centre of diversity | 2020 | Tchokponhoué et al. | Scientific Reports | rnaturalearth |
PeatFire: an agent-based model to simulate fire ignition and spreading in a tropical peatland ecosystem | 2020 | Widyastuti et al. | International Journal of Wildland Fire | nlrx |
RivFishTIME: A global database of fish time‐series to study global change ecology in riverine systems | 2020 | Comte et al. | Global Ecology and Biogeography | rfishbase |
Validation and uncertainty analysis of the match climates regional algorithm (CLIMEX) for Pest risk analysis | 2021 | Roigé & Phillips | Ecological Informatics | CoordinateCleaner |
How loneliness is talked about in social media during COVID-19 pandemic: Text mining of 4,492 Twitter feeds | 2020 | Koh & Liew | Journal of Psychiatric Research | rtweet |
Potential conflict extent between two invasive alien pests, Rhynchophorus ferrugineus and Paysandisia archon, and the native populations of the Mediterranean fan palm | 2020 | Bombi | Journal for Nature Conservation | rgbif |
Ocean acidification alters bacterial communities on marine plastic debris | 2020 | Harvey et al. | Marine Pollution Bulletin | taxa |
Tracing the footsteps of autophagy in computational biology | 2020 | Sarmah et al. | Briefings in Bioinformatics | biomartr |
Antimicrobial use quantification in adult dairy cows – Part 1 – Standardized regimens as a method for describing antimicrobial use | 2020 | Schrag et al. | Zoonoses and Public Health | skimr |
Environmental DNA metabarcoding of cow dung reveals taxonomic and functional diversity of invertebrate assemblages | 2020 | Sigsgaard et al. | Molecular Ecology | bold, taxize |
Dispersal ability correlates with range size in Amazonian habitat-restricted birds | 2020 | Capurucho et al. | Proceedings of the Royal Society B: Biological Sciences | rgbif |
Clustered versus catastrophic global vertebrate declines | 2020 | Leung et al. | Nature | rfishbase |
To clean or not to clean: Cleaning open‐source data improves extinction risk assessments for threatened plant species | 2020 | Panter et al. | Conservation Science and Practice | rgbif, CoordinateCleaner |
Spatio-temporal dynamics in airport catchment areas: The case of the New York Multi Airport Region | 2021 | Teixeira & Derudder | Journal of Transport Geography | skynet |
First measurements of field metabolic rate in wild juvenile fishes show strong thermal sensitivity but variations between sympatric ecotypes | 2020 | Chung et al. | Oikos | rnaturalearth |
Genome-scale CRISPR screening at high sensitivity with an empirically designed sgRNA library | 2020 | Henkel et al. | BMC Biology | biomartr |
Coasting along to a wider range: niche conservatism in the recent range expansion of the Tawny Coster | 2020 | Chowdhury et al. | Diversity and Distributions | CoordinateCleaner |
Missing Data: Current Practice in Football Research and Recommendations for Improvement | 2020 | Borg et al. | Center for Open Science | visdat |
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes | 2020 | Kasmanas et al. | Nucleic Acids Research | rentrez |
ФАКТОРИ ЧУТЛИВОСТІ ҐРУНТІВ ВОЛИНСЬКОЇ ОБЛАСТІ ДО ЕРОЗІЇ | 2020 | Матвійчук & Матвійчук | Вісник Полтавської Державної Аграрної Академії | rnoaa |
The Open Access Advantage for Studies of Human Electrophysiology: Impact on Citations and Altmetrics | 2020 | Clayson et al. | Center for Open Science | rcrossref, rAltmetric, roadoi, rentrez |
Analyzing long-term impacts of ungulate herbivory on forest-recruitment dynamics at community and species level contrasting tree densities versus maximum heights | 2020 | Nopp-Mayr et al. | Scientific Reports | skimr |
The difference between cellulolytic “culturomes” and microbiomes inhabiting two contrasting soil types | 2020 | Evdokimova et al. | PLOS ONE | rnaturalearth |
Long-Distance Migration of the Globe Skimmer Dragonfly to Japan Revealed Using Stable Hydrogen (δ 2H) Isotopes | 2020 | Hobson et al. | Environmental Entomology | rnaturalearth |
Eusociality Shapes Convergent Patterns of Molecular Evolution across Mitochondrial Genomes of Snapping Shrimps | 2020 | Chak et al. | Molecular Biology and Evolution | treeio |
osmdata | 2017 | Padgham et al. | The Journal of Open Source Software | osmdata |
Can we manage a future with more fire? Effectiveness of defensible space treatment depends on housing amount and configuration | 2020 | Braziunas et al. | Landscape Ecology | NLMR |
The epidemiology of muscle-strengthening exercise in Europe: A 28-country comparison including 280,605 adults | 2020 | Bennie et al. | PLOS ONE | rnaturalearthdata, rnaturalearth |
LCVP, The Leipzig catalogue of vascular plants, a new taxonomic reference list for all known vascular plants | 2020 | Freiberg et al. | Scientific Data | taxize |
Global patterns and predictors of trophic position, body size and jaw size in fishes | 2020 | Kopf et al. | Global Ecology and Biogeography | rfishbase |
Phylogeography of a widespread Palaearctic forest bird species: The White‐backed Woodpecker (Aves, Picidae | 2020 | Pons et al. | Zoologica Scripta | rgbif |
i2d: an R package for simulating data from images and the implications in biomedical research | 2020 | Liang et al. | Bioinformatics | magick |
Species sensitivities to a global pollutant: A meta‐analysis on acoustic signals in response to anthropogenic noise | 2020 | Kunc & Schmidt | Global Change Biology | rotl |
Distinguishing between dispersal and vicariance: A novel approach using anti‐tropical taxa across the fish Tree of Life | 2020 | Ludt & Myers | Journal of Biogeography | rgbif |
Increasing importance of anthelmintic resistance in European livestock: creation and meta-analysis of an open database | 2020 | Rose Vineer et al. | Parasite | rnaturalearth |
Stress Signal Regulation by Na/K-ATPase As a New Approach to Promote Physiological Revascularization in a Mouse Model of Ischemic Retinopathy | 2020 | Wang et al. | Investigative Opthalmology & Visual Science | magick |
Human neuronal signaling and communication assays to assess functional neurotoxicity | 2020 | Loser et al. | Archives of Toxicology | magick |
Mining Twitter to detect hotspots in psychology | 2021 | Bittermann et al. | Zeitschrift für Psychologie | rtweet |
Integrative taxonomic revision of the woodlouse-hunter spider genus Dysdera (Araneae: Dysderidae) in the Madeira archipelago with notes on its conservation status | 2020 | Crespo et al. | Zoological Journal of the Linnean Society | phylotaR |
Asymptotic results with estimating equations for time-evolving clustered data | 2021 | Dumitrescu & Schiopu-Kratina | Journal of Statistical Planning and Inference | rnoaa |
Virulence characterization and comparative genomics of Listeria monocytogenes sequence type 155 strains | 2020 | Wagner et al. | BMC Genomics | treeio |
Cumulative habitat loss increases conservation threats on endemic species of terrestrial vertebrates in Mexico | 2021 | Mayani-Parás et al. | Biological Conservation | rgbif |
Diversity and conservation of traditional African vegetables: Priorities for action | 2020 | Zonneveld et al. | Diversity and Distributions | rgbif |
Great minds think alike, or do they often differ? Research topic overlap and the formation of scientific teams | 2021 | Smith et al. | Journal of Informetrics | refsplitr |
A longitudinal study of multi-word constructions in L2 academic writing: the effects of frequency and dispersion | 2020 | Candarli | Reading and Writing | tesseract |
Integrative analysis of mRNA and miRNA sequencing data for gliomas of various grades | 2020 | Gvaldin et al. | Egyptian Journal of Medical Human Genetics | UCSCXenaTools |
Mapping Africa’s Biodiversity: More of the Same Is Just Not Good Enough | 2020 | Farooq et al. | Systematic Biology | CoordinateCleaner, rnaturalearth |
Identification of Arctic Food Fish Species for Anthropogenic Contaminant Testing Using Geography and Genetics | 2020 | Walker et al. | Foods | baRcodeR |
A Bayesian framework for assessing extinction risk based on ordinal categories of population condition and projected landscape change | 2021 | Fitzgerald et al. | Biological Conservation | stplanr |
Reduced Global Genetic Differentiation of Exploited Marine Fish Species | 2020 | Gandra et al. | Molecular Biology and Evolution | rfishbase |
Food Classification with Convolutional Neural Networks and Multi-Class Linear Discernment Analysis | 2020 | Ball | arXiv | magick |
MethylDetectR: a software for methylation-based health profiling | 2020 | Hillary & Marioni | Wellcome Open Research | magick |
Linear infrastructure habitats increase landscape-scale diversity of plants but not of flower-visiting insects | 2020 | Dániel-Ferreira et al. | Scientific Reports | rotl |
Controlling lead release due to uniform and galvanic corrosion — An evaluation of silicate-based inhibitors | 2021 | Li et al. | Journal of Hazardous Materials | pdftools |
A workflow with R: Phylogenetic analyses and visualizations using mitochondrial cytochrome b gene sequences | 2020 | Toparslan et al. | PLOS ONE | treeio |
Seasonal metabolic adjustments in an avian evolutionary relict restricted to mountain habitat | 2021 | Oswald et al. | Journal of Thermal Biology | treeio |
Developing a Non-destructive Metabarcoding Protocol for Detection of Pest Insects in Bulk Trap Catches | 2020 | Batovska et al. | Research Square | bold, rentrez |
Shifts from pulled to pushed range expansions caused by reduction of landscape connectivity | 2020 | Dahirel et al. | Cold Spring Harbor Laboratory | nlrx |
Inter-site and interpersonal diversity of salivary and tongue microbiomes, and the effect of oral care tablets | 2020 | Maruyama et al. | F1000Research | treeio |
Leaf reflectance spectra capture the evolutionary history of seed plants | 2020 | Meireles et al. | New Phytologist | taxize |
IMPACT OF CLIMATE CHANGE ON THE GEOGRAPHICAL DISTRIBUTION OF A CLOUD FOREST INDICATOR TREE SPECIES | 2020 | Santos et al. | Revista Árvore | rgbif |
Evaluating the quality of OSM roads and buildings in the Québec Province | 2020 | Moradi | | osmdata |
Social listening, modern slavery, and COVID-19 | 2020 | Lucas & Landman | Journal of Risk Research | rtweet |
The transboundary nature of the world’s exploited marine species | 2020 | Palacios-Abrantes et al. | Scientific Reports | rfishbase |
The role of functional strategies in global plant distribution | 2020 | Liao et al. | Ecography | rgbif |
An examination of the import of live reptiles from Indonesia by the United States from 2000 to 2015 | 2021 | Janssen & Gomez | Journal for Nature Conservation | taxize |
Staying Afloat: Planning and Managing Climate Change and Sea Level Rise Risk in Florida’s Coastal Counties | 2020 | Hines et al. | Urban Affairs Review | pdftools, tesseract |
Multipath: An R Package to Generate Integrated Reproducible Pathway Models | 2020 | Hammoud & Kramer | Biology | webchem |
Extensive wetland development in mid-latitude North America during the Bølling–Allerød | 2020 | Byun et al. | Nature Geoscience | neotoma |
Using Social Media to Assess the Impact of Weather and Climate on Visitation to Outdoor Recreation Settings | 2020 | Wilkins | | osmdata |
Explaining the worldwide distributions of two highly mobile species: Cakile edentula and Cakile maritima | 2020 | Shaw et al. | Journal of Biogeography | rnaturalearth |
What Is Happening on Twitter? A Framework for Student Research Projects With Tweets | 2021 | Boehm & Hanlon | Journal of Statistics and Data Science Education | rtweet |
Global macroecology of nitrogen‐fixing plants | 2020 | Tamme et al. | Global Ecology and Biogeography | CoordinateCleaner, taxize |
Photosystem II heat tolerances characterize thermal generalists and the upper limit of carbon assimilation | 2021 | Perez et al. | Plant, Cell & Environment | phylocomr, brranching |
Updating the distribution of Vampyrum spectrum (Chiroptera, Phyllostomidae) in Colombia: new localities, potential distribution and notes on its conservation | 2020 | Esquivel et al. | Neotropical Biology and Conservation | CoordinateCleaner |
Diversity Patterns of Neotropical Ferns: Revisiting Tryon’s Centers of Richness and Endemism | 2020 | Suissa & Sundue | American Fern Journal | CoordinateCleaner |
Gluten Intake and All-Cause and Cause-Specific Mortality: Prospective Findings from the UK Biobank | 2020 | Behrendt et al. | The Journal of Nutrition | skimr |
Lead DEAD/H box helicase biomarkers with the therapeutic potential identified by integrated bioinformatic approaches in lung cancer | 2021 | Cui et al. | Computational and Structural Biotechnology Journal | UCSCXenaTools |
The great greenbriers gall mystery resolved? New species of Aprostocetus Westwood (Hymenoptera, Eulophidae) gall inducer and two new parasitoids (Hymenoptera, Eurytomidae) associated with Smilax L | 2020 | Gates et al. | Journal of Hymenoptera Research | treeio |
Delineating reef fish trophic guilds with global gut content data synthesis and phylogeny | 2020 | Parravicini et al. | PLOS Biology | rfishbase |
Post-Genotyping Optimization of Dataset Formation Could Affect Genetic Diversity Parameters: An Example of Analyses with Alpine Goat Breeds | 2020 | Pogorevc et al. | Research Square | rnaturalearth |
Community Detection Problem Based on Polarization Measures | 2021 | Gutiérrez García-Pardo et al. | MDPI AG | rtweet |
Cluster Analysis of Regional Research and Development Disparities in Europe | 2020 | Ionela-Andreea & Marian | Studies in Business and Economics | rnaturalearth |
Global surveillance of potential antiviral drug resistance in SARS-CoV-2: proof of concept focussing on the RNA-dependent RNA polymerase | 2021 | Mari et al. | Cold Spring Harbor Laboratory | rnaturalearth |
Urban-adapted mammal species have more known pathogens | 2021 | Albery et al. | Cold Spring Harbor Laboratory | taxize |
Predicting the current and future distribution of the western black-legged tick, Ixodes pacificus, across the Western US using citizen science collections | 2021 | Porter et al. | PLOS ONE | FedData |
Mammal species occupy different climates following the expansion of human impacts | 2021 | Pineda-Munoz et al. | Proceedings of the National Academy of Sciences | rgbif |
Non-canonical Wnt/PCP signalling regulates intestinal stem cell lineage priming towards enteroendocrine and Paneth cell fates | 2021 | Böttcher et al. | Nature Cell Biology | biomartr |
Describing spatiotemporal memory patterns using animal movement modelling | 2021 | Thompson et al. | arXiv | NLMR |
Rebound in functional distinctiveness following warming and reduced fishing in the North Sea | 2021 | Murgier et al. | Proceedings of the Royal Society B: Biological Sciences | rredlist, rfishbase |
Inter- and intra-specific variation in hair cortisol concentrations of Neotropical bats | 2021 | Sandoval-Herrera et al. | Cold Spring Harbor Laboratory | rotl |
Climate warming changes synchrony of plants and pollinators | 2021 | Freimuth et al. | Cold Spring Harbor Laboratory | rgbif, taxize |
Distribution of alien tetrapods in the Iberian Peninsula | 2021 | Ascensão et al. | NeoBiota | rgbif |
The traded water footprint of global energy from 2010 to 2018 | 2021 | Chini & Peer | Scientific Data | comtradr |
Safety concerns of recycling postconsumer polyolefins for food contact uses: Regarding (semi-)volatile migrants untargetedly screened | 2021 | Su et al. | Resources, Conservation and Recycling | webchem |
Tracing total and dissolved material in a western Canadian basin using quality control samples to guide the selection of fingerprinting parameters for modelling | 2021 | Laceby et al. | CATENA | tidyhydat |
Ecological correlates of species’ roles in highly invaded seed dispersal networks | 2021 | Vizentin-Bugoni et al. | Proceedings of the National Academy of Sciences | taxize |
Crowdsourcing snake identification with online communities of professional herpetologists and avocational snake enthusiasts | 2021 | Durso et al. | Royal Society Open Science | taxize |
Understanding human adaptation to drought: agent-based agricultural water demand modeling in the Bow River Basin, Canada | 2021 | Ghoreishi et al. | Hydrological Sciences Journal | nlrx |
Projected shifts in loggerhead sea turtle thermal habitat in the Northwest Atlantic Ocean due to climate change | 2021 | Patel et al. | Scientific Reports | rerddap |
Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico | 2021 | Murphy et al. | mSphere | rotl |
Evaluation of the MOD11A2 product for canopy temperature monitoring in the Brazilian Atlantic Forest | 2021 | De Andrade et al. | Environmental Monitoring and Assessment | MODIStsp |
Distribution of Five Aquatic Plants Native to South America and Invasive Elsewhere under Current Climate | 2021 | Lozano | Ecologies | spocc |
Meta‐analysis shows the evidence for context‐dependent mating behaviour is inconsistent or weak across animals | 2021 | Dougherty | Ecology Letters | rotl |
Indian genetic heritage in Southeast Asian populations | 2021 | Changmai et al. | Cold Spring Harbor Laboratory | rnaturalearth |
Disinformation creep: ADOS and the strategic weapon-ization of breaking news | 2021 | Nkonde et al. | Harvard Kennedy School Misinformation Review | rtweet |
<strong>DIVERSITY AND DISTRIBUTION OF NIGERIAN LEGUMES (FABACEAE)</strong> | 2021 | BELLO et al. | Phytotaxa | CoordinateCleaner |
Protected Area Networks Do Not Represent Unseen Diversity | 2021 | Delso et al. | Research Square | CoordinateCleaner |
Open source tools for geographic analysis in transport planning | 2021 | Lovelace | Journal of Geographical Systems | stplanr, opentripplanner |
Data proliferation, reconciliation, and synthesis in viral ecology | 2021 | Gibb et al. | Cold Spring Harbor Laboratory | taxize |
Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles | 2021 | Andreu-Sánchez et al. | GigaScience | rotl |
Bird habitat preferences drive hemoparasite infection in the Neotropical region | 2021 | DELATORRE & CAMPIÃO | Integrative Zoology | rredlist |
Analysing landscape effects on dispersal networks and gene flow with genetic graphs | 2021 | Savary et al. | Molecular Ecology Resources | NLMR |
Genomic evidence of past and future climate-linked loss in a migratory Arctic fish | 2021 | Layton et al. | Nature Climate Change | weathercan |
The potential for expansion of irrigated rice under alternate wetting and drying in Burkina Faso | 2021 | Akpoti et al. | Agricultural Water Management | MODIStsp |
Pleistocene climatic fluctuations promoted alternative evolutionary histories in Phytelephas aequatorialis, an endemic palm from western Ecuador | 2021 | Escobar et al. | Journal of Biogeography | spocc, CoordinateCleaner |
ORFik: a comprehensive R toolkit for the analysis of translation | 2021 | Tjeldnes et al. | Cold Spring Harbor Laboratory | biomartr |
Past and future potential range changes in one of the last large vertebrates of the Australian continent, the emu Dromaius novaehollandiae | 2021 | Ryeland et al. | Scientific Reports | CoordinateCleaner |
Transformation of <i>n</i>-alkanes from plant to soil: a review | 2021 | Thomas et al. | Copernicus GmbH | rnaturalearth |
The Early Branching Group of Orbiniida Sensu Struck et al., 2015: Parergodrilidae and Orbiniidae | 2021 | Meca et al. | Diversity | rnaturalearth |
rfaRm: An R client-side interface to facilitate the analysis of the Rfam database of RNA families | 2021 | Sellés Vidal et al. | PLOS ONE | treeio, magick |
Satellite DNA in Neotropical Deer Species | 2021 | Vozdova et al. | Genes | treeio |
Completeness of open access FluNet influenza surveillance data for Pan-America in 2005–2019 | 2021 | Simpson et al. | Scientific Reports | RSelenium |
Fabaceae (legume) pollen as an anthropogenic indicator in eastern North America | 2021 | Teale & Chang | Vegetation History and Archaeobotany | neotoma |
Modelling the global burden of drug-resistant tuberculosis avertable by a post-exposure vaccine | 2021 | Fu et al. | Nature Communications | rdhs |
Universal principles underlying segmental structures in parrot song and human speech | 2021 | Mann et al. | Scientific Reports | magick |
Successful breeding predicts divorce in plovers | 2020 | Halimubieke et al. | Scientific Reports | rnoaa |
A Bayesian approach for fitting and comparing demographic growth models of radiocarbon dates: A case study on the Jomon-Yayoi transition in Kyushu (Japan | 2021 | Crema & Shoda | PLOS ONE | c14bazAAR |
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass | 2021 | Lovell et al. | Nature | rnaturalearth |
Would you please like my tweet?! An artificially intelligent, generative probabilistic, and econometric based system design for popularity-driven tweet content generation | 2021 | Garvey et al. | Decision Support Systems | hunspell |
Age, Origin, and Biogeography: Unveiling the Factors Behind the Diversification of Dung Beetles | 2021 | Schwery & O’Meara | Cold Spring Harbor Laboratory | rgbif, taxize |
Evaluating the motivation of Red Cross Health volunteers in the COVID-19 pandemic: a mixed-methods study protocol | 2021 | Heyerdahl et al. | BMJ Open | rtweet |
An Analytical Framework for Measuring Inequality in the Public Opinion on Policing—Assessing the Impacts of COVID-19 Pandemic Using Twitter Data | 2021 | Adepeju & Jimoh | Journal of Geographic Information System | rtweet |
Examining the utility of DNA barcodes for the identification of tallgrass prairie flora | 2021 | Herzog & Latvis | Applications in Plant Sciences | taxize |