rOpenSci | Converting MedDRA Terminology to Linked Data using rdflib
Reported on: Sep 6, 2019

Converting MedDRA Terminology to Linked Data using rdflib

English • By Tim Williams • Featuring: rdflib

As part of the PhUSE project Going Translational with Linked Data (GoTWLD) we use the rdflib package to translate MedDRA terminology to Linked Data as RDF Triples.

rOpenSci package or resource used*

rdflib

Use Case URL

MedDRA Terminology Conversion to RDF

Image

MedDRA-ProgramFlow-medDRAReadAsc|630x500

Sector

Pharmaceutical, Biotech, Medical/Healthcare

Field(s) of application

Medical terminology coding including Adverse Events. Biomedical research, Pharmaceutical industry.

What did you do?

Used an ontology-based approach to convert the multiple hierarchical ASCii files to a unified Linked Data Graph representation. MedDRA terminology files are under license, but the conversion R scripts are freely available to anyone who wishes to convert their MedDRA coding to Linked Data.